Scomber japonicus (chub mackerel): 128371893
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Entry
128371893 CDS
T09718
Symbol
msi2b
Name
(RefSeq) RNA-binding protein Musashi homolog 2b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128371893 (msi2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128371893 (msi2b)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128371893 (msi2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_PARP14_1
CSD
Motif
Other DBs
NCBI-GeneID:
128371893
NCBI-ProteinID:
XP_053188253
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Position
13:complement(21398780..21642932)
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AA seq
407 aa
AA seq
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MEGDGSQATSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPATAYGPVAAAAVAAARGSGRGARGRGGYLAYPQSTGPGLPDYGFYSAPSDQRGGP
CSFADYGSLGPQAAQMLHSEHATSACNSPLQHLHSPDQFKNPGTNPSRPGGFPGANSPGP
VADLYGPSSQDSAVGNYISAASPQPGSGFGPSITGPLIATAFTNGYH
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacgggagtcaagccacatccggaagcctaaatgattcacaacatgacccg
ggtaaaatgtttatcggtggcctcagctggcaaacctcaccagacagccttagagactat
tttagtaaattcggagaaataagagaatgtatggtgatgagagaccccacgacaaagcgc
tcaagaggatttgggtttgttacgtttacagatgctgccagtgtagataaagtcttagct
caacaacaccacgaattagactcaaagacgattgatcctaaggttgcctttcctcgtcgc
gcccagcctaagatggtcacaagaacaaagaaaatatttgtgggtggcttgtcagccaat
acagtagtggaagacgtgaagcagtattttgaacagtttgggaaggttgatgatgccatg
cttatgtttgataagacaactaacagacatagaggatttggtttcataacttttgagagt
gaagacatcgtagagaaagtctgtgaaattcattttcatgaaatcaataacaaaatggta
gaatgtaagaaggcccagcccaaggaggtgatgttcccgccaggtacacgagggcgagcc
aggggtctgccctacaccatggatgccttcatgcttgggatgggcatgctgagttaccct
aatattgtggcaacgtacggccgcggatacactggattcgcaccaagctacagctaccag
ttccctggcttcccagcgacagcatacggaccggtggcggcagcagcagtagcagcagcg
cgtggctcaggtaggggggcccgtggaagaggcggctacttggcgtacccacagagcaca
gggccaggcctccccgattatgggttttactctgcgcccagtgaccagaggggggggccc
tgctcctttgctgactatggctccctggggccccaagcggctcagatgctgcacagtgag
catgccacctccgcctgcaactcccccctccagcacctacacagcccggatcaatttaag
aacccaggcaccaacccttcaaggcccggaggtttcccaggtgctaacagtccaggacct
gtggctgacctgtacggacctagcagccaggattcagctgtgggcaactacatcagtgct
gctagccctcagcctggctctgggtttggccccagcatcacaggcccgttgattgcgaca
gcttttacaaatggataccattga
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