Scomber japonicus (chub mackerel): 128371906
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Entry
128371906 CDS
T09718
Symbol
hnrnpl
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128371906 (hnrnpl)
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
128371906 (hnrnpl)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
RRM_occluded
RRM_3
DUF4523
Motif
Other DBs
NCBI-GeneID:
128371906
NCBI-ProteinID:
XP_053188274
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All DBs
Position
13:complement(26894436..26905607)
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AA seq
529 aa
AA seq
DB search
MAAAAGRYYGEGGRATKRQKTEEGGMTTESYDDPHKPLPSPVVHIRGLVDGIMEADLVEA
LQEFGAISYVVMMPKKRQALVEYEDMNGSCNAVTYAAENQVYIAGHPAFINYSTSQKISR
PGDSDDTRSVNNVLLLTIINPIYPITTDVLYTICNNCGPVQRIVIFRKNGVQAMVEFDSV
QSAQRAKASLNGADIYSGCCTLKIEYAKPARLNVFKNDQDTWDYTNPNLSGQDADGEGNW
NNSQDPNANPNKRQRQPALLGDHPPDYGGPQGGYHSYNDDSYGPPPPHRMGPGMGGRGRG
SQRYGPGYGPPPPEYGPHADSPVLMVYGLEPSKVNSDKVFNIFCLYGNVERVKFMKSKPG
AAMVEMGDCYSVDRAITHLNNNFLFGQKLNVCVSKQQAIVPGQCYQLEDNSSSFKDFHGS
RNNRFTSPEQAAKNRIQHPSNVLHFFNAQPDISVEIFNQVCDELGIKSPSSVKLFTGKSE
RSSSGLLEFESINDAMEALAMINHYQMKNPSGPYPYTLKLCFSTTHHAN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctgcgggccgatactacggagaaggcggcagagcaacgaaaagacagaaa
accgaggaaggaggaatgacaacggagagctacgatgaccctcacaaaccgctcccctcc
ccggtggtgcacatcaggggcctggttgacggtatcatggaggctgacctggtggaggcc
ctgcaggagtttggagccatcagttatgtggtcatgatgcccaagaagcgccaggccttg
gtggagtatgaagacatgaacggctcctgcaacgctgtcacatacgcagcagagaaccag
gtctacatcgcaggccaccccgccttcattaattactccaccagccaaaagatctcgcgg
ccaggagattcagacgacacccggagcgtcaacaacgtgctgctgctcacaatcataaac
cccatctatccaatcaccacggatgtcctctacaccatttgtaacaactgtggtcctgta
cagaggatcgtcatcttcagaaagaatggtgttcaggccatggttgagtttgattcggtc
caaagtgcgcaaagggctaaagcctctctgaatggagcagacatctattctggttgctgc
actctgaaaattgaatatgccaagccagcacgccttaatgtcttcaagaatgaccaggac
acgtgggattacacaaaccctaacctgagtggccaagatgctgatggtgaaggcaattgg
aacaattcacaagatcctaatgccaatcccaacaaacgtcagaggcagcctgctctgctg
ggagaccacccacctgattatggtggccctcaaggaggttatcatagctataatgatgat
agctacggcccccctcctcctcaccgtatggggccaggtatgggtgggcgcggtcgcggt
agccagcgctacggccctggatacggccccccgcctcctgaatacggccctcacgctgat
tccccggttcttatggtgtatggcctcgagccctcaaaggtcaattctgacaaggtcttc
aacatcttctgcctgtatggaaatgtagagagggttaagttcatgaagagcaagcccggg
gcagcgatggtggagatgggcgactgttattcagtggacagggcgatcactcacctaaac
aacaacttccttttcggacagaaactcaacgtttgcgtgtccaaacagcaggccatcgtg
ccaggacagtgctaccagctagaagacaactccagcagtttcaaagatttccacggctcc
cgcaataaccgcttcacctcgccagagcaagcagccaagaaccgaatccagcaccccagc
aacgtcctgcacttttttaacgcacagcctgacatttctgtagagatcttcaaccaggtc
tgtgatgaattggggattaagagcccatcgagtgtgaaacttttcactggaaagagtgag
cgaagttcgtccggccttctggagtttgaatccatcaatgatgccatggaagcgctagct
atgattaaccattaccagatgaaaaatcccagtgggccttacccatacaccctgaagctg
tgtttctccaccacacaccacgccaactaa
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