Scomber japonicus (chub mackerel): 128371939
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Entry
128371939 CDS
T09718
Symbol
gria3a
Name
(RefSeq) glutamate receptor 3a isoform X1
KO
K05199
glutamate receptor 3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128371939 (gria3a)
04082 Neuroactive ligand signaling
128371939 (gria3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128371939 (gria3a)
Ion channels [BR:
sjo04040
]
Ligand-gated channels
Glutamate (ionotropic)
128371939 (gria3a)
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Mannitol_dh
DUF2061
Motif
Other DBs
NCBI-GeneID:
128371939
NCBI-ProteinID:
XP_053188326
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Position
13:20619377..20692024
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AA seq
886 aa
AA seq
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MWHRTIATVLVLLYFWGDSLAGFPNQINIGGLFMRSTVQEHSAFRFAVQLYNTNQNVTEK
PFHLNYNVDNLESSNSFSVTHAFCSQFSRGVYAIFGFYDRKSMNTLTSFCGALHTSFITP
SFPIDADVQFVIQMRPGLRGAVLSLLDHYKWEKFVYLYDTDRGFAILQAIMESAVANNWQ
VTARSVGNIVDPTEYRRIIEEMDRRQEKRFLIDCEVDRINSILEQVVTSGKNGRGYHYIL
ANLGFSNMSLDRVISGGANITGFQIINPDSPIVQQFLQRWERLDEREFPEAKNTPLKYTS
ALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMT
GNIQFDTFGRRSNYTIDVYEMKSGGPRKIGYWNEYEKFVYIMDQQVTNESSSVENRTIVV
TTIMEAPYVMYKKNYVQMDGNDRYEGYCVDLASEIAKHVGIKYKLSIVPDGKYGARDPET
KTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSF
LDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLDENDEAKDPQSPPDPPNDFGIFNS
LWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESA
EDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFAKTTPDGVSRVRKS
KGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAVNLAVLKLNEQ
GLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMTVALIEFCY
KSRQETKRLKLAKNAQNFKPAPPANTQNFATYREGYNVYGTESVKI
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaccgcacaatagcgacagtccttgttttgttgtatttttggggggactcgctg
gcagggtttccaaatcagatcaacattggtggactgttcatgcgctctacagtgcaggag
cacagcgccttcaggtttgctgtccagctgtataacaccaaccagaatgtgacggagaaa
ccctttcacctcaattacaatgttgacaacctggagtcctcaaacagcttctctgtcaca
cacgccttctgctctcagttctcccggggagtttacgccatcttcggcttctacgacaga
aagtccatgaacacgctgacctccttctgcggggcgctgcacacctccttcattacaccc
agcttccccatcgacgctgacgtgcagtttgtcatccagatgaggcctggtttgcgagga
gctgttctcagtctcctggaccattataagtgggagaagtttgtctacctttacgacact
gacagaggttttgcgatcctccaagccatcatggagtccgctgtggccaataactggcag
gtgacggctcgctcagtagggaacatcgtggaccccacagagtacagacgcatcattgag
gagatggaccgccggcaggagaaacgctttctaattgactgtgaggtggacaggatcaac
tcgatactggagcaggtggtgacctcgggaaagaacggcagaggataccactatatcctc
gcgaacctgggcttttccaacatgagcctggacagggttatttctggtggagccaacatc
acaggcttccagatcatcaacccagacagccccatcgtccagcagttcctccaacgctgg
gagcgcctggatgaaagagaatttccagaagccaaaaacactccactgaagtacacatca
gcactaacccatgatgccatcctcgtgattgctgaggctttccggtatcttcgtcgccag
cgagtggacgtgtctcgcagggggagtgcgggtgactgccttgccaaccctgctgtgccc
tggagccaaggcatcgacatagaaagagcccttaaaatggtccaagtgcaaggtatgacg
ggaaacatccagtttgacacatttggtagaagatctaattacacaattgatgtgtatgag
atgaagtcaggaggccccaggaagatcggctactggaatgagtacgaaaaatttgtatat
ataatggatcagcaggtcaccaacgagtcctcttctgtggaaaaccgaacaattgtggtc
actactattatggaagctccgtatgtgatgtacaagaaaaactatgtgcagatggatggg
aatgacagatatgaaggctactgtgtcgatttagcttctgaaattgcaaagcatgtgggg
ataaaatataagctgtcaatagttccggatgggaagtacggagccagagatccagagacc
aagacgtggaacgggatggtgggtgaactggtttatgggagagctgacatagccgtggct
cccctaactataacgctggtacgggaggaagtgatagacttctctaagccctttatgagc
ttgggaatctccattatgattaagaagcctcaaaagtccaagcccggggtgttttccttc
ctggacccactggcctatgagatttggatgtgtatagtttttgcctatattggcgtgagt
gtggtgctcttcctggtcagccgtttcagcccttacgaatggcatctggatgagaacgat
gaggccaaagaccctcagagccctccagaccctccaaatgactttgggatttttaatagc
ctgtggttctccctgggcgccttcatgcagcaaggatgcgatatctcaccaaggtctttg
tctgggcgtatcgttggaggagtgtggtggttcttcaccctcatcatcatctcttcctac
acagcaaacctggctgctttcctcacagtggagaggatggtttctccaattgaaagcgca
gaggacctggctaagcagacagagatcgcttatgggacgctagactcaggctccacaaag
gagttttttaggcgctccaaaatagcagtttatgagaaaatgtggtcatacatgaaatca
gctgaaccttcagtgtttgccaagacaacaccagacggggtttctcgggtacgaaagtcg
aagggcaagttcgcctttcttctcgagtccactatgaacgagtacatagagcagcggaag
ccatgtgacaccatgaaagttggcggaaacctcgactctaagggctacggtgtggctaca
cctaaaggctctgcattaagaaatgctgttaacctggcagtgttaaaactgaatgagcaa
ggcctcttggacaaattgaaaaacaaatggtggtacgacaagggagagtgcggcagcggg
ggaggtgactctaaggacaagacaagtgcactaagcctgagcaacgtggcaggagtcttc
tatattctggtgggagggcttggcctggctatgactgtggctttgatagagttctgctat
aagtcaaggcaagaaaccaaaagactgaagctggcaaagaatgctcaaaactttaagcca
gcccctccggcaaacacccagaattttgccacgtatcgtgaaggctacaacgtgtatggg
acagagagtgttaaaatctag
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