Scomber japonicus (chub mackerel): 128372292
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Entry
128372292 CDS
T09718
Symbol
smad1
Name
(RefSeq) mothers against decapentaplegic homolog 1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04081
Hormone signaling
sjo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128372292 (smad1)
09133 Signaling molecules and interaction
04081 Hormone signaling
128372292 (smad1)
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GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
128372292
NCBI-ProteinID:
XP_053188404
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Position
2:complement(16093089..16110933)
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AA seq
467 aa
AA seq
DB search
MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELERALSCPGQ
PSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALECCEYPFGSKQKDV
CINPYHYKRVDSPVLPPVLVPRNSEFNAKHTMLPRFRNPLQQNEPHMPQNATFPESFPQA
NTMPFPHSPGNSYPNSPGSGSNVTFPHSPSSSEPSSPFQMPETPPPAYMPPEEQMTQDCP
QPMDTNLMAPPLPLESNNRADVQPVAYEEPKHWCSIVYYELNNRVGEAFQASSTSVLVDG
FTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSR
NCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAELLAQSVNHGFEAVYELTKMCTIRMSFVK
GWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcacctcgctcttctctttcaccagccccgcggtcaaacggctgctgggctgg
aagcagggagacgaggaagagaagtgggcagaaaaggcagtggatgctctggttaagaaa
ctgaaaaagaagaagggagccatggaggagctggagagggctctcagctgccccggtcag
cccagtaactgtgtgacaatcccccgctccctggacggacggctgcaggtgtcccacagg
aaaggtctgccgcatgtcatttattgtcgggtgtggcgctggcccgacctgcagtcccac
catgagctgaaggccctggagtgctgcgagtacccgttcggctccaaacagaaggatgtg
tgtatcaacccctaccactacaaacgtgtggacagtccagtgctgccccctgtgttggta
ccaaggaacagcgagttcaatgccaagcatacgatgttgcctcgcttccgcaatcctcta
caacagaacgagccacacatgccccagaatgccaccttccccgaatcctttcctcaggcc
aatacaatgcctttccctcattcgccaggaaacagctacccaaattcgccaggaagcggc
agcaacgtcaccttccctcattcaccatccagctccgagcccagcagtccattccagatg
ccagagactccccctcctgcctacatgcccccagaggagcagatgactcaagattgcccc
cagccaatggacaccaacctcatggcaccacccttgcccctagagagtaacaaccgggca
gatgtgcagccagttgcctatgaggaacccaagcactggtgctccattgtttactacgag
ctcaacaatcgtgttggagaagcgttccaggcttcctccaccagcgtgctcgttgatggc
ttcacagatccctccaataaccgcaaccgattctgcctcggcctgctctcaaacgtcaac
cgcaactccaccattgagaacacccggcggcacatcggcaaaggtgtccatttgtattac
gttggtggtgaggtgtatgcagaatgtctgagtgacagcagtatcttcgtccagagtcgt
aactgtaactaccatcacggcttccatcccacaactgtgtgtaagattcccagcggctgc
agcctgaagattttcaacaaccaggagtttgctgaactgcttgcccagtctgttaaccat
ggctttgaggctgtttatgagctcaccaagatgtgtaccatccgtatgagctttgttaag
ggctggggcgcagagtaccaccgccaggatgtgaccagcacaccctgctggattgagatt
cacctgcatggtcccctgcagtggttggataaggtgctaacccagatgggttccccccac
aaccctatatcctctgtgtcctag
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