KEGG   Scomber japonicus (chub mackerel): 128372498
Entry
128372498         CDS       T09718                                 
Name
(RefSeq) ras-related protein ORAB-1-like
  KO
K07874  Ras-related protein Rab-1A
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    128372498
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sjo04131]
    128372498
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sjo04147]
    128372498
   04031 GTP-binding proteins [BR:sjo04031]
    128372498
Membrane trafficking [BR:sjo04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    128372498
 Autophagy
  Other autophagy associated proteins
    128372498
Exosome [BR:sjo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128372498
  Exosomal proteins of other body fluids (saliva and urine)
   128372498
  Exosomal proteins of colorectal cancer cells
   128372498
GTP-binding proteins [BR:sjo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    128372498
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA SRPRB FeoB_N AAA AAA_7 ABC_tran PduV-EutP AAA_16 LANC_like AAA_29 Septin AAA_22 AAA_5 CRAL_TRIO_2
Other DBs
NCBI-GeneID: 128372498
NCBI-ProteinID: XP_053188568
LinkDB
Position
14:complement(32003407..32020957)
AA seq 203 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAG
GGEKPNVKLTPGTTVKPSSGGCC
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaatcctgaatatgactatttattcaagctgctcctgattggtgactctggtgttgga
aagtcttgcctccttctccgatttgcagatgacacatacacagaaagttacattagcact
attggtgtggacttcaaaatacgaactatagaactagatggaaagaccattaaacttcag
atttgggatacagcaggtcaagagaggtttcgcacaatcacatccagctactacagaggt
gctcatggtatcattgtagtgtatgacgtcacagaccaggagtccttcaacaatgtcaaa
cagtggctacaggagattgaccgctacgccagtgaaaatgtcaacaagctattggttggg
aacaagtgtgacctgacaacaaagaaggtggtggattacacaacagcgaaggagtttgca
gactctctgggtatcccattcttggaaaccagtgccaagaatgccaccaatgtggagcag
gccttcatgaccatggctgctgaaataaagaagaggatgggccctggggccacagctggt
ggaggggagaagcccaatgtgaagctgacccccggcactactgtcaagccttcatcagga
gggtgctgctga

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