Scomber japonicus (chub mackerel): 128372567
Help
Entry
128372567 CDS
T09718
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128372567
04121 Ubiquitin system [BR:
sjo04121
]
128372567
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128372567
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128372567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
128372567
NCBI-ProteinID:
XP_053188639
LinkDB
All DBs
Position
14:29576851..29579317
Genome browser
AA seq
504 aa
AA seq
DB search
MERYSTSVPYDKSSKRYKDISQAVTYHIAKDMLPLSTVERPGFKNLLHVLDPRYVLPGRK
YFSKTAIPQMYLLCKDSVQKEILEAKYFATTSDLWSSRTSEPYISLTVHFIDEEWKLQTR
CLETAYFPEDHTGELIAEGLKEALLSWGLIEKKMVCITTDSGANVVKATSLNNWTRLQCF
GHRLHSAIGAAGKDRRVDRAVGVCKKVVSAFSYSWKKKSALSKAQERLHLPTHQLITESL
TRWGSRQRMVARVLEQQKAITEVLSADKNTRHLIPTWQDIDVLESMNAALTPLLEFTDSL
SGESYVTVSYVKPVLHLFRSNLLEVNEGDTQLTKEMKTKIMAYLDEKYSDTDDLLDMATL
MDPRFKVQYIRPEKVGAIKMRAVSEVMKEGQGQSLAGPSEGAADQGAEGGAAAAAAPPLP
LGVKKQRKSLGSFFKKQSQEEVDLSDEQQVESELERYLRCPDADSEAEPLDWWRLHEHNF
PRLSQLAKKYLYIPATNTSVMYEY
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggagaggtactcaacatcagtgccttatgacaagtcatctaaacgctataaagatatc
agtcaggcagtcacttatcacatagctaaggacatgcttccactcagtaccgtggagagg
ccgggttttaaaaacctacttcacgtgcttgacccacgatatgttcttcctgggcgaaaa
tacttctcaaaaactgccattccccaaatgtacctgttgtgcaaagactccgtgcaaaag
gaaatattggaagcaaagtactttgccacaacatccgacctgtggtcaagccgtacgtcg
gagccgtacattagcctgacagttcattttatagatgaggagtggaaattacaaacacga
tgccttgaaacggcatattttcccgaagaccatacaggagaactaattgcagaagggctg
aaagaggcactgctgtcctggggtctgattgagaaaaaaatggtgtgcatcaccacagac
agtggtgcaaatgtggtgaaggcgacttcactcaacaactggacaaggctacaatgtttt
ggccatcgtttgcattctgcaattggtgctgcaggaaaggatagaagagtggacagggct
gtaggtgtttgcaagaaagtggtctctgccttttcttactcatggaagaaaaagagtgca
ctctccaaagcacaggaacgtctccatcttcccacacaccagctgatcacagagtcacta
accagatggggctcaaggcagaggatggtggcaagggtcctagagcaacaaaaggccatt
actgaagttctgtctgcagacaaaaacaccaggcacctgatcccaacttggcaggacatt
gatgtccttgagtctatgaatgcagccttgactcctctcctggagttcacagactccctt
tcgggtgagtcatatgtgaccgtctcttatgtgaaacctgtgctccacctgttccgctcc
aatttgcttgaagtaaatgagggggacactcagctcacaaaagagatgaagacaaaaata
atggcctatcttgatgagaagtattcagacacagacgatctccttgatatggctaccttg
atggaccccaggtttaaagtccagtacatcagaccagagaaggtaggggccattaaaatg
agagcagtgtctgaggttatgaaggaaggccaaggccagtcactggcagggccttctgag
ggagcagcagatcaaggtgcagaaggtggagctgcggctgccgctgcaccacctctacca
ctgggcgtgaagaagcaacgcaagtcattggggagcttcttcaaaaagcagagtcaagaa
gaagttgacctgtctgatgaacaacaagtggagagtgagctggaaaggtacctgaggtgc
cctgatgcagacagtgaggctgaacccctggactggtggaggctccatgaacacaacttc
cccagattgtctcaactggcaaaaaagtacttgtacatcccagccaccaacacatcagtg
atgtatgagtactga
DBGET
integrated database retrieval system
