Scomber japonicus (chub mackerel): 128372614
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Entry
128372614 CDS
T09718
Symbol
fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03460
Fanconi anemia pathway
sjo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128372614 (fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
128372614 (fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128372614 (fancl)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128372614 (fancl)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128372614 (fancl)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128372614 (fancl)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
128372614 (fancl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d2
FANCL_d1
zf-RING_2
SLX1_C
DUF2286
zf-RING-like
zf-HC5HC2H
PHD_NSD
zf-rbx1
zf-C2H2_AcuF
Motif
Other DBs
NCBI-GeneID:
128372614
NCBI-ProteinID:
XP_053188694
LinkDB
All DBs
Position
14:29238041..29266134
Genome browser
AA seq
371 aa
AA seq
DB search
MESLLVEDNPLLLPLNKDKTIYDGFITVQERDFRMRILLPPNRQLKQAKLHCCWQLKDLL
RGYEHIVKQRLQQSADLVSFILELKTVLEVGLKSRPDCRSIPPPQYYSQLISEMETLGWD
KLLFIDTEFRTLRLKAEDSCGRQHILTINLKSKHPAEAPECSADLPVALAITWTPQITLE
QLHSQFLLVLESLTDFWDVLDEIDSKTWILEPEKPSRADTMRRIAIGNNVSIKVEVDPRH
PKMLPECCLLGAEHVVTPLRNKLNANMHLWNPDSSVFNNLRDVLEIEFPSPATHEKSSFS
VECGICYAYRLEAAIPDQVCNDPRCGQPFHQACLYEWLRALPSTRQSFNIVFGECPYCSK
PITVRMAAQKS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggagagtttactagtagaagacaacccgctgcttctacctctcaacaaggacaaaact
atctatgacggattcatcacagtccaggagagagacttcagaatgagaatactactacca
ccaaatcgccaactcaaacaggccaagctgcactgctgttggcagttgaaagacctgttg
cgtggatatgagcacatagtgaagcagaggctgcagcagtcggctgatcttgtcagtttc
attctggagctgaagaccgtcttggaagtgggcctgaagagccgtcccgactgccgctca
atcccacctccgcagtattactcccagctcatctctgagatggaaacccttgggtgggac
aagctgctgttcatagacaccgagttccgcacgttgaggctgaaggcggaggactcttgt
ggaaggcaacacattctcactattaacctcaagtctaagcaccctgcagaggctcctgaa
tgctcggctgaccttccagttgctctggccataacctggacaccacagattactctggag
cagcttcacagccagttcctgctggttttagagtccctgaccgacttctgggacgtcctg
gatgagattgacagcaagacctggattctggaaccggaaaaacccagccgggccgacacc
atgaggaggatcgccatcggaaacaacgtatccatcaaagtggaggtggatcccagacac
cctaagatgctgccagagtgctgcctgctgggagccgagcatgtggtgactcctctgagg
aacaagctgaacgccaacatgcacttgtggaacccggactccagcgtcttcaacaacctc
cgggatgttttggagatcgaattcccgtcacctgccacccacgaaaaatctagcttcagt
gttgaatgtgggatctgttacgcttatcgtcttgaggctgcaattcctgatcaggtgtgt
aatgaccctcgctgtggtcagcccttccaccaggcctgcctgtatgagtggctgcgagcg
ctgccctccaccaggcagagcttcaacattgttttcggagagtgtccttactgcagcaag
cccattactgtgagaatggcagcccagaagtcttga
DBGET
integrated database retrieval system
