Scomber japonicus (chub mackerel): 128372621
Help
Entry
128372621 CDS
T09718
Symbol
lrpprc
Name
(RefSeq) leucine-rich PPR motif-containing protein, mitochondrial
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128372621 (lrpprc)
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
128372621 (lrpprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_3
PPR_long
PPR_1
TPR_24
ELYS
TPR_MalT
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
128372621
NCBI-ProteinID:
XP_053188703
LinkDB
All DBs
Position
14:12092056..12155271
Genome browser
AA seq
1419 aa
AA seq
DB search
MSALLRSARLLRISPSGLLQLTATKRTGPPLGRLYSGALSGTRTGACSRLASGNVCSRVW
PNAAGCVRTYAIATEQKDEASVAVRSKQAQQFDWALTKLDSSVRRTGRITKTLLLRVFHD
ICRTGYPSGNQALLLLRSCGSLLPEVTLEERTELAHRVWEKLQDLGAQYDVSHYNALLKV
YLQNDFKFSPTDFLAKMEAANVQPNRVTYQRLIAAYCQNGDIEGASTILGFMKSRDLPIT
EAVFNSLLTGHARAGDITSSQNILTVMRGAGIEPGPDTYVSLLNVYAEKGDMDSLKKTME
AAESADCSLMDKDIMQVIFTLAKAGHQQHVPEIVERLRHEKGYIPDAMNLCLSLITQGLE
DTAFHILRTFPVHNDGNSDSPDLGSFFLRHCVNMGTSLEKISSYCKELQEANLHSAPLKF
TLCCALEAKKTGLSLELMKMLKEQDLPIRPHYFWPLLTQHVKDNSIADVVDVVKGMQALG
VIPDVETLTNYILPVFPNMEAARKALKDSGVSLESEGFLSSEIRSVAASNLAELYSRLSD
SSFPPLDLIVFRGSLILGFRRSTDVESMAKITELLYKDERFSRENSKPADTASFFMYNLI
DSMSEGEVQAQEDKLRNYFNQLQAKNVIISGNIYRGVRNLLDSYHVPELIKDVLALVDPK
DPLLSNGSAATVPRATGTSSTAEELQKRLAKLKAENKPFDIILKQTINALCAEENLQSAL
ELKQQHEDEMTAGGYAALINLCCRHDNVEEALSLKREMTRKDSSVALDAPKYLALVKTLS
KNGRVEEAIDILKEMKEKDIVMSDTNITMLFHTLNSIVAKGGAPVIKRLQDTIFTLGLAK
PTANLCSPLITAYLESKDLAGALDAALECQKLYNQLPRIHDIIVGLVEKGDTELLQKAMD
VVSQERGEMTMLYDLFFAFLQTGRFREARKIIETPGLRARPGRLQWYAEKCIASSQMEAL
EQMVDMTAKLFECDRDEMYSYVLRFCKATNNWQKAEATWTKMQEENVIPRERTLRLLADI
LKKNGQEVPFEVPETWFEQAATAKQAKPAAIPPKVESGGDYQGQLLSLCKKGKAKEAYGM
LKEADKKGVVLGPAPYDHLVRALLAEGSIDDAMVVKEIAASHVPGFALSDIASSLLIISY
SKKGKAKEALETLKSTLKADQVPSHLAVTRLVQGLGSCGDVAGIQEVEALMKSLGTTLNL
SSMLFINNMAIAHIKSGDLDTAVEQMESVYTSPDSTNPSMSFVFRKVLEDDNDKALDKLS
IMAERLANHFACYRPASDLFLQLLDMDKVEDAKFMLARCNALAEQKVVLMSYVAQKAQTP
GQVRKIKALVSLIPDFMEKELLHSYLMKCHSLDKDLPSAKALYEQMQKHGAVDELSLKRL
AVLYRNAGETVPFTEPPESFKFYAEKLREKAAKTKPAEE
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgctcttgagatcagcccggttactcaggatttcgccttcgggcttgcttcag
ctcacagcgactaaaagaaccggaccgcccctgggtcggctgtacagcggggctctcagc
ggcaccaggaccggagcttgttcccgtctcgcctctggaaatgtgtgcagtcgcgtgtgg
ccgaacgctgcgggatgtgtgcgaacctacgccatcgccacagagcagaaggatgaggcc
agtgttgcggtccggtccaagcaggcacagcagtttgattgggccctgacaaaactggac
agctctgtgaggaggacgggtcgcatcactaagacactgctgctccgtgtcttccatgat
atctgcaggacaggttatcccagtggcaaccaggccttgctgctgctgcgtagctgcggg
tccctgctgcctgaggtgaccctggaggagcgcactgagctggctcaccgtgtctgggag
aagcttcaggatctgggtgcacaatacgatgtcagtcactacaacgccttgctgaaggtt
tacctgcagaatgatttcaagttctcacccactgacttcctggccaagatggaagcagct
aacgttcagcccaacagagttacctaccagagactcatcgcagcatattgccaaaatgga
gatatcgagggagccagcaccatcttgggtttcatgaagagcagagatctacccattact
gaagctgttttcaactccctgttaacaggccatgctcgtgcaggcgacatcaccagttct
cagaacatcctgactgttatgcgaggagcaggaattgaaccgggtcctgacacttacgta
tcactgcttaacgtctacgctgagaagggagacatggatagtctgaaaaagactatggag
gcagcagagagtgcagactgcagcctgatggacaaggacatcatgcaggttatcttcact
ctggctaaggccggacaccagcagcacgtcccagagatagtggagcgcttgaggcatgag
aagggttatattccagatgccatgaacctgtgtctgagcctcatcacccagggcctggag
gacacagctttccacatcctgaggacttttcccgtgcacaatgacggcaactctgactcc
cccgatcttggcagtttcttcctcagacactgtgtcaacatgggcacgtcactggagaag
atcagcagctactgcaaagagctccaggaggcaaatctgcacagtgcgccactcaagttc
accctgtgctgtgctctggaggccaagaagaccggattgtctttagagctgatgaagatg
ttgaaggagcaggacttacccataagacctcactacttctggcccctcctcactcagcat
gtgaaggataacagcatagctgatgtggtggatgttgtgaagggcatgcaggcgcttggg
gtgatccctgatgtcgagaccttaaccaactatatcctccccgtcttccccaacatggag
gcagctcggaaggccctcaaggattcaggtgtgtctctggagtcggagggcttcttgtct
tcagagattcgctcggtggcggcttccaacttggcagaactctacagccgactatctgat
tcatccttccccccgctggacctcattgttttccgtggcagcctcatcctgggcttcaga
aggtctactgatgtggagagcatggctaagattactgagctcttgtacaaagatgagcgc
ttctccagagaaaactccaagcctgctgacacagcatccttcttcatgtacaatctgatc
gacagtatgtcagaaggggaggttcaggctcaggaagacaaactgcggaattacttcaat
caactacaggctaagaacgtaattatttctggaaacatctacagaggcgtcaggaacctg
ctggactcctaccacgtcccagagctcatcaaggatgtgcttgctttggtggacccgaaa
gacccattgttgtccaatggttctgcagcaactgttcctcgtgccactggaactagcagt
acagcggaagagcttcagaagagactggccaaactgaaagctgaaaacaaaccatttgac
atcatacttaaacaaactatcaatgctttatgtgctgaggagaacctgcagagcgccctt
gagctgaagcagcagcacgaggacgagatgacagccggcggctacgctgccctcatcaac
ctgtgctgtcgccacgacaatgtggaggaggcgctgagcctgaagagggaaatgactcgt
aaggactcatctgtggcgctggatgcccctaaatacctcgcactggtcaagaccctctca
aagaatggcagagtggaggaggcgatagacatcctgaaggagatgaaggagaaggacata
gtgatgagtgacaccaacatcaccatgctcttccacacgctcaactccatagtggccaag
ggcggcgcccctgtaatcaaacgcctgcaggacaccatcttcaccctcggacttgccaaa
cccaccgccaatctgtgctcacccctgattactgcatacctggagagtaaggacctggcc
ggagctttagatgcagcactggagtgtcagaagctctacaaccagctgcctcgcatccac
gacatcattgttggcctggtggagaaaggagacactgaactgctgcagaaagctatggat
gtcgtgagtcaggagcgaggagagatgaccatgctgtatgatctgttcttcgccttcttg
cagacgggccgcttccgtgaggctcgtaagatcattgagacccctgggctgagggcaagg
cctgggcgcctgcagtggtacgcagagaaatgcatcgccagcagccagatggaggccttg
gagcagatggtggacatgaccgccaaactgtttgagtgcgacagagacgagatgtacagt
tacgtcctccgtttctgcaaggcgacaaacaattggcagaaggccgaggcaacgtggaca
aagatgcaggaggaaaatgttattcccagggagaggaccctgcgcttgctggcagacatc
ctgaagaaaaatggccaggaggtgccctttgaggtgcctgagacctggtttgaacaagct
gccactgcaaagcaggccaaaccagcagccatcccccccaaagtagaaagtggcggtgac
taccagggccaactgctgtccctctgtaagaaagggaaagccaaagaagcctatggcatg
ctgaaggaagccgataaaaagggtgtggtactgggccctgccccttacgaccacctggtc
cgtgccctgttggccgagggctccattgatgatgcaatggtagtcaaggaaattgctgcg
tcccatgtcccaggttttgcactgagtgatatcgcttctagtttgctcatcatctcatac
agcaagaaaggcaaggcaaaagaggctcttgagacactgaagtctacgctgaaggcagac
caggtgccctcacaccttgcggtcaccagactggttcagggcctgggtagctgtggtgat
gttgcaggaattcaggaagtggaagcactgatgaagagtcttggcacaaccctaaacctg
tccagcatgttgtttatcaacaacatggccattgcacacatcaagagtggtgacttggac
acagcagtagagcagatggagtcagtatacaccagtccagacagcacgaatcccagtatg
tccttcgtcttcagaaaggttttggaagatgataacgacaaagctttggacaagttgagt
attatggcagagcggctggccaaccacttcgcctgctacagaccagcttcagaccttttc
ctccagctgctggatatggacaaagtcgaggacgccaagttcatgctggctcgctgtaac
gccttggccgaacagaaggtggttctcatgtcctatgtggctcaaaaggctcagactcct
ggacaggtgaggaaaattaaggccctggtgagcctgattccagacttcatggagaaggag
ctcctccactcatatctgatgaagtgtcactctctggataaggacttgccatcagccaag
gctctgtatgagcagatgcagaagcatggggcagtagacgagctgtcactcaaacggctg
gctgtgctgtaccgcaatgcaggagagacagtgcccttcactgagccccctgagtcattc
aagttttatgcagaaaagctgagagagaaagctgccaaaaccaaaccagcagaagaataa
DBGET
integrated database retrieval system
