Scomber japonicus (chub mackerel): 128372658
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Entry
128372658 CDS
T09718
Symbol
papolg
Name
(RefSeq) poly(A) polymerase gamma
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128372658 (papolg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128372658 (papolg)
Enzymes [BR:
sjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
128372658 (papolg)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
128372658 (papolg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Nrap_D2
GH97_C
Motif
Other DBs
NCBI-GeneID:
128372658
NCBI-ProteinID:
XP_053188749
LinkDB
All DBs
Position
14:27906748..27924571
Genome browser
AA seq
841 aa
AA seq
DB search
MKEMSSAMPGGQQPQRHYGITSAISLAPPREIDHQYTKKLCDAMKPFGVFEDEEELNHRL
AVLGKLNNFVKEWIAEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPR
HVERSDFFQSFFEKLKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNL
DLRGDSILRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLG
FLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDP
RVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLF
EPPNFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFP
GSKENRNENDFVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMK
IEATHVKKKQLHQYLPAELVQKKKRSIAELNRSSNGGSSKRMSLDSSHLDSSRDTDSGTP
ICSPTSKPSKPTSDTDDSVSPPKQLFVESSPAPSAAAAAAAAAPPTTDQGMSIPVIGSKP
PVKVVKPSSPPASSSVTPPAPSGNVKPNAASSPKEEPNGLDDSVNGAPAKRPHSPTQEDL
AKRHKDTEEVSNDDSTFKEPYPPSDPHVHGDGPNITPLSGSKAKPIPTIDTSRTQRLPSM
ELPDASSPLPASNSCRVVKNSIKLALNRHNITPPKPPVFEGTLTTDAPPSSEEKGMSIPV
IGSKNTASKPVVPPVGSSIPTLVSRGADPLNGAPSKRPHSPSLEEQAKRLKETEKARIHI
A
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtccagcgccatgcctggtgggcaacagcctcagagacactatggcatc
acctctgccattagcctcgcacccccacgagaaatagaccaccagtacaccaagaagctc
tgtgatgctatgaagccttttggggtgtttgaagacgaagaggaattgaaccacagactt
gcagttcttggaaagttgaataactttgttaaagaatggatcgcagagatcagtgaatta
aagaaccttccaccatcagctataagctgtgtcgggggcaagatatttacatttggttca
taccgtcttggagtgcacacaaaaggagccgatattgacgccttatgtgtggctccgcgc
cacgtagagagaagcgactttttccagtctttcttcgagaaattgaaacagcacgaagag
atcaaagacctgagggccgtcgaggatgcctttgtaccggtgataaaattcaaatttgac
ggaatagagattgacctgctttttgccagactggccttacagtccattccagacaacttg
gacctgaggggggactccatcctgagaaacttggacattcgttgtatccgcagccttaac
ggctgtcgagtgactgatgaaattttgtacctcgtgccaaacaaagaaaacttcagactg
acattgagagccatcaaactgtgggcgaagcgtcgcgggatctactccaacatgctgggg
tttctgggtggagtgtcgtgggccatgctggtggccaggacctgccagctctacccaaac
gctgtggcagccacgctcgtccacaagttcttccttgttttctccaaatgggaatggccg
aatcctgtgctattgaaacaacctgaggacagtaatctgaatctacctgtgtgggatccc
agagtcaacccatctgacagataccacctgatgcccatcatcacgcctgcctacccccag
cagaactccacatacaacgtctccacgtcaacacgcaccatcatgagcgaggagttcaaa
tacggtctcagcgtcacagatgagattcttcagggaaaagcagaatggtccaagctcttt
gagcctcctaatttcttccaaaagtacaagcattacatcgttctgactgccagtgcatcc
acagaagaaaaccacttagaatggatcggtctagtggagtcaaagatccgcgttttggtg
ggaaacctggagaggaatgaatacatcaccctggctcacgtcaacccacagtccttccct
gggtccaaagagaaccgcaatgagaacgactttgtgtccatgtggttcatcgggatcatc
ttcaagaaagtggagaacgcagagagtgtgaatattgacctgacgtacgacatccagtcc
ttcacagacactgtgtacagacaagccaacaacatcaacatgctgaaggacggcatgaag
atcgaagcaacgcatgtaaagaagaagcagctccaccagtaccttcctgctgaactggtg
cagaagaagaagaggagcatagcagagttgaaccgcagctctaacggggggagctctaag
aggatgtctctggacagcagtcacctggacagctccagagacacagactcagggactccc
atctgctccccaaccagcaaaccctccaagcccacgtctgacacagatgacagcgtcagc
cctcccaagcagctttttgtggaaagctctccagcacccagtgcagcagcagcagcagca
gcagcagctcctcctacaacagaccagggcatgtccatccctgtcatcggctcaaagccg
ccagtaaaagtggtgaaaccttcttctccaccagccagcagctccgtcaccccccctgcg
ccgagcgggaacgtgaagcccaacgccgcaagcagccccaaagaggagcccaacggcctg
gacgactctgtcaacggagctccagccaagagaccgcactcacctacacaagaggacctg
gccaagaggcacaaagacacagaggaggtctccaatgacgactctactttcaaagagcca
tatccaccatctgacccccatgtgcacggagatggacccaacattactcctctttctgga
tcaaaggcgaagcccattccaaccatcgatacctcaagaacacagagacttcccagcatg
gagctgccagacgcctcctcgcctcttccagccagcaacagctgccgcgtggtgaaaaat
tccattaaactggccctcaaccgccacaacatcacacctcccaagcccccagtgttcgag
ggaaccctcaccactgacgctccccccagcagtgaagaaaaaggcatgtccattcctgtc
attggctcaaaaaatactgcatccaaacccgtcgtgccccccgtcggcagctccatcccc
acactagtgagccgaggagccgacccgctgaacggagcgccctcaaagagaccccactct
ccctccctggaggaacaggccaagaggctgaaagaaacagagaaggccagaatccacata
gcttga
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