Scomber japonicus (chub mackerel): 128372782
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Entry
128372782 CDS
T09718
Symbol
opn3
Name
(RefSeq) opsin-3
KO
K04256
c-opsin
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128372782 (opn3)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sjo04030
]
128372782 (opn3)
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128372782 (opn3)
G protein-coupled receptors [BR:
sjo04030
]
Rhodopsin family
Vision
Opsin
128372782 (opn3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
128372782
NCBI-ProteinID:
XP_053188920
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Position
14:25997218..26005739
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AA seq
387 aa
AA seq
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MNPANETSTERSAEQYIFAVGTYKLLAFTIGTIGVFGFCNNVVVILLYCKFKRLRTPTNL
LLVNISLSDLLVSLIGINFTFASCVKGGWIWSQATCMWDGFSNSLFGIVSIMSLAALAYE
RYIRVVHAQVVDFPWAWRAISHIWLYSLAWTGAPLLGWNRYTLEIHQLGCSLDWASKDPN
DASFILFFLLGCFFVPVGIMIYCYGNILYTVQMLRSIQDLQTVQIIKILRYEKKVAVMFL
LMISCFLVCWTPYAVVSMMEAFGRKSMVSPTVAIIPSFFAKSSTAYNPLIYVFMSRKFRR
CLLQLLCSRLSWLQRNLKERPLAPVERPIRPIVVSGTCGSRDRPKKRVRFSSSSIVFIIT
TDDFRRLDVTSKAGDCSEVNVIQVRPL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgccaacgaaaccagcaccgagagaagtgcagaacaatatatttttgcagtt
ggcacctacaaacttctggcttttaccatcgggactattggagtgtttggcttctgcaac
aacgttgttgtcatcctgctctactgtaaattcaagaggctgcggacgcccaccaatttg
ttactggtcaacataagtttaagtgatcttctagtttctctgatcggaataaactttacc
tttgcttcgtgcgtcaaaggaggatggatttggagccaggcaacatgcatgtgggacggc
ttcagcaacagcttatttggcatcgtctccatcatgagtctggcagccctggcctatgag
cgctacatccgggtggtccacgcccaggtggtggactttccctgggcgtggcgggccatc
tcccacatctggctgtactctctagcctggacgggggctccactcctgggctggaaccgg
tacactctggagatccaccagctgggctgctcgctggactgggcatctaaggatccaaac
gatgcttcattcatcctcttcttcctccttggctgtttctttgtgcctgtgggcatcatg
atctactgctatgggaacatcctctacacagtgcaaatgctgcgctccatccaggacctc
caaacagtccagatcatcaagatcttgcgctacgagaagaaggtggccgttatgtttctt
ctaatgatctcctgcttcctggtgtgttggacaccctacgctgttgtgtccatgatggaa
gccttcggcaggaagagcatggtctctcccacagtggccatcatcccttcattctttgcc
aagtctagcacagcctacaaccccctcatctatgtattcatgagtcgaaagttccggcgc
tgtttgctgcagctgctctgttcgaggctctcttggctgcagcgaaatctcaaagagcgc
ccactggctccggtcgaacgccccatccgaccgatcgtcgtgtccggcacgtgcggctca
agggaccgacccaaaaagagggttaggttcagctcctcgtccatcgtcttcatcatcacc
accgacgatttccgccgattggacgtgacctctaaggctggagattgctcagaggttaat
gtcattcaagtgaggccattgtga
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