Scomber japonicus (chub mackerel): 128372812 Help Entry 128372812         CDS       T09718                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo03430   Mismatch repair Brite KEGG Orthology (KO) [BR:sjo00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     128372812 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sjo03400]     128372812 (msh6) DNA repair and recombination proteins [BR:sjo03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      128372812 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP Motif Other DBs NCBI-GeneID:  128372812 NCBI-ProteinID:  XP_053188952 LinkDB All DBs Position 14:complement(21695791..21703620) Genome browser AA seq 1383 aa AA seqDB search MAKQSSLFNFFTKSPPPVSKPKPSPSPTEADLPSSVEKSNSSPKEQAKQAAQQQPTKTNR AKPKSNSKPAKGGFNKLFGNKTPTTKESSTCSFNAGALVWAKLEGHPWWPCMVVPQPLTG QQMRGRGRSQRIHVHFFDEPPTRGWVSTKYIREYQGSDSSDAKTGGVFFSGKPVIRRAME LADSFMFDSPEKRLEMPRCMDPSDEEEDDDDDDEEMELDNSTVTDEEVSDEDEQAKKNVK SSKDSRRSSRGSTEKGNKAKRRRIIVASDSDASDEEFKPEHAASSSEDEEEEGTVSSEGE QEESTQESEVDSPVKPIKRKRPAEKPADKKEKPSIILPSAPKRPPTAIAVDVKSRLSAFS APDSFESQANGSGSSGSATVWDHEKLEWLQDGRRKDRQRRRQTEDDYDPTNLYVPEDFLN RSTPGMRRWWQLKSEMLDTVIFYKVGKFYELYHMDAVIGVNELALTFMKGSWAHSGFPEI GFARFSDVLVQKGYKVARVEQTETPDMMEARCKTMVKPTKFDRVVRREVCRIITRGTQTY SVLDGAPSESQSKFLLSLKEKAEEESSGRCRTYGVSFVDTSVGYFHIGQFTDDRHCSRLR TLIAHFAPAEVLFERGNPSVETRKILKASLSSALQEGLNAGTQFWDAQKTLKTLSEEDYF SDTAAKDEGTGKSFLPPLLKKMTSESDSLCLTPKEGYELALSALGGCIFYLKKCLVDQEL LSMANFEEYVPVDVEMEKAAGPTSFFARTRQRMVLDGVTLANLEIFQNGLGGTEGTLLER LDTCSTPFGKRLLKQWLCAPLCNPSSIRDRLDAVDDLMGFQAQATEVTDLLKKLPDLERL LSKIHSIGTPLKSQDHPDSRAVLYEEVTYSKRKIADFLTALEGFQTMQEIISVLSPISAQ FQSDLLTQVVSLKGEKDGLFPDLSAELKRWETAFDHQKARTTGNITPKAGFDPEFDQALT GIKNCERELQDYLDRQKKRLGCKSMAYWGTGRNRFQMEVPDSVSERNIPEEYEVKSTKKG WKRYVTKETERLFSELQGLEEKRDAALKDCMRRLFYNFDKNYKDWKTGVECMAVLDVLLA MSRYSQGGDGSMTRPQVLLPEGDDQLAPFLDLTGSRHPCVTKTFFGDDFIPNDIYIGCAG SSENEEESHASCVLVTGPNMGGKSTLMRQCGLVIVLAQLGCYVPAESLRFTPVDRVFTRL GASDRIMAGESTFFVELSETASILHHATTHSLVLLDELGRGTATYDGTAIASAVVKELAE KICCRTLFSTHYHSLVEDYANNPAVRLGHMACMVENECEDPSQETITFLYKFITGACPKS YGFNAARLASLPEAVIQSGHRKAKEFEKSTISLRLFKKLCLFAEDTSLGNTHFASLVQMI NTL NT seq 4152 nt NT seq  +upstreamnt  +downstreamnt atggcgaaacaaagctctcttttcaatttcttcactaagtctccgccaccggtatccaag ccgaaacccagcccttctccgaccgaggcagacctgccttcctcagtcgaaaagtccaac tcctctccgaaagagcaagctaagcaggcagcacagcagcagcccaccaagaccaacaga gcaaagccgaaaagtaactccaagcctgcgaaagggggattcaacaaactgtttggaaac aagacaccaacaactaaagagagctccacatgttccttcaatgctggtgctcttgtgtgg gcaaaactggagggtcacccttggtggccatgcatggttgtaccacagcctctgactgga caacagatgagaggccgtggtcggagtcaacgcatacatgtccatttctttgatgaacct cccaccaggggatgggtcagcaccaaatatatcagagagtaccaaggctcagacagtagc gacgctaaaactggaggggtgtttttcagtggaaagcctgtaatccgtcgtgcaatggag cttgctgacagtttcatgtttgacagccccgaaaaaagattggaaatgcctcgctgcatg gatccatcagatgaggaagaggatgatgatgatgatgatgaagaaatggagcttgacaat tcaacagtgactgacgaagaggtcagtgatgaggatgaacaggcaaaaaagaatgtgaag tcatccaaggacagtcgacgttcatcccgtggttcaacagaaaaaggaaataaggccaag cgccgtcgtatcattgtagcctcagacagtgatgcatcagatgaggaattcaagccagaa catgcagcaagcagcagtgaggatgaagaggaggaaggaacagtgagcagtgaaggggag caagaggagagcacacaagagtcagaagttgacagccctgttaaacctataaagcgcaaa cgtcctgcagaaaagcctgctgataaaaaggaaaagccatccatcatcctgcctagtgca ccaaagcgacctccaacagctattgcagtcgacgtaaagtcccgtttgtcagctttctct gctcctgacagctttgagagccaggcaaatggctcaggctccagtggaagcgccacagtt tgggaccatgagaagctagagtggttgcaggacggcaggaggaaagacagacaaaggcgg cggcagacagaggatgactacgatcctaccaacctgtatgtgccggaagactttctaaac agaagcacccctggtatgcgccgctggtggcagctcaaatctgagatgttagacacagtc attttctataaggtggggaagttttacgagctctaccacatggatgctgtgattggagtc aacgagttggcactaactttcatgaagggaagctgggcgcactctggcttcccagagatc ggctttgcacgtttctcagatgttctggtccaaaaaggctacaaggtggctcgtgtagag cagacggagaccccagacatgatggaagcacgctgtaagaccatggtgaagcccaccaag tttgaccgtgtggtgagaagagaagtgtgccggattatcacacgaggaacccaaacttac agcgtgctggacggagctccttcagaaagtcagagcaagttcctgctgagtttaaaggaa aaggctgaagaggagagctctggtcgatgccgcacatatggagtgagctttgtagacacg tccgtgggttattttcatattggtcagttcacagatgatcgtcactgctcgcgtctgcgc accctgatagcacactttgcccccgccgaggtgctctttgaaaggggtaacccatctgtt gaaacacgcaaaatactcaaggcgtctctgtcctctgctctgcaggaaggactcaatgcg ggcactcagttctgggatgctcaaaaaactcttaaaaccctctcagaagaagattacttc agtgacaccgctgccaaggatgaggggacagggaagagctttcttcctcctcttctaaaa aagatgacctctgagagtgattcactgtgccttaccccaaaggagggctacgagctggca ctgtcagcactgggcggatgcattttctatttgaagaagtgtctggtagaccaggagctg ctctccatggccaactttgaagaatatgtccctgttgatgttgagatggagaaagccgct ggacccaccagcttttttgctcggactcgtcagcgcatggtcttggacggagtgactctg gcgaacctagaaatctttcagaatggcttaggaggaacagaggggacactgttggagcga ttggacacctgctctaccccgtttggcaagaggctgctgaagcagtggctgtgtgctcct ctctgtaacccttcatcaatcagggacagactggacgcagtggacgacctgatgggattt caggctcaggctactgaggttacagacctgctgaagaagctcccagatttggaacgtctc ctgagtaaaattcacagcatcggcactcctctgaagagccaggaccatccagacagcaga gcggttctctatgaggaggtcacctatagcaagcgcaagatagcagacttcctcacagca cttgaagggttccagaccatgcaggagatcatttctgtcctttctccaatttctgcccaa tttcagtctgacttacttacccaagtggtcagtctgaagggtgaaaaggatggcctcttt ccagacctctctgctgaacttaagcgctgggagacggctttcgaccaccagaaagctcgc actaccggcaacataacccctaaagctggctttgacccagagtttgaccaggctctaact gggatcaagaactgcgagcgagagctgcaggattacctggacagacagaaaaaaagactg ggctgtaaaagcatggcctactggggcactgggcgaaaccgctttcagatggaggtgccc gacagcgtctcggaaaggaatattcccgaagaatacgaggtgaagtcgacaaaaaaaggc tggaagcgttacgtgacaaaggagactgagcggctgttctctgagctgcaaggattggag gagaagagagacgctgctctgaaagactgcatgaggaggctcttctacaacttcgacaaa aactacaaagactggaagactggtgtggagtgcatggcggtgcttgatgtgctgttggcc atgtcacgctacagtcagggaggagatggatcaatgaccaggccacaggtgctgctccct gaaggtgatgaccaattagcacccttccttgacctcactggatcccgccacccatgtgtc acaaagaccttttttggggatgactttatcccgaatgacatttacatcggctgtgctggt agcagtgagaatgaggaggaaagccatgcctcatgtgtcctcgtcacaggcccgaacatg ggtggaaagtctactctcatgagacagtgtggactcgtgatcgtcctggctcagctgggc tgctacgttcctgctgaaagcctgcgcttcacaccagttgacagagtcttcactcggctg ggagcctcggatcgtattatggccggagagagtaccttctttgtggagctgagtgagact gccagcatcctgcaccatgccactacacactcccttgtgctcctagatgaattaggaagg ggcacagccacatatgatggcacagcgatcgccagcgctgttgtgaaggagcttgctgag aagatctgctgtcgcaccctcttttccacacattaccactccctggtggaggactacgcc aacaaccctgctgtgcggttgggccacatggcgtgcatggtggagaatgaatgtgaggac ccgagccaagagacaatcacattcctctacaagttcatcactggggcttgtccaaagagc tacggcttcaacgccgctcggctcgccagcctgccagaggcagtcattcaatcaggacac agaaaggccaaagagtttgagaagagcaccatcagcctcagacttttcaagaagctgtgc ctgtttgctgaggacacttcactgggaaacacacactttgcatcacttgttcagatgatc aacaccctgtag

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