Scomber japonicus (chub mackerel): 128372874
Help
Entry
128372874 CDS
T09718
Symbol
ikzf1
Name
(RefSeq) DNA-binding protein Ikaros isoform X1
KO
K09220
IKAROS family zinc finger protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128372874 (ikzf1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128372874 (ikzf1)
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128372874 (ikzf1)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128372874 (ikzf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
zf-C2H2_11
CPSF100_C
zf-C2H2_REST
DUF6487
zf-C2H2_STOP2_C
GAGA
Motif
Other DBs
NCBI-GeneID:
128372874
NCBI-ProteinID:
XP_053189040
LinkDB
All DBs
Position
14:25665236..25683075
Genome browser
AA seq
571 aa
AA seq
DB search
MLGWNEEVQWRGEGLRAQLHGAAAALRPSAHGAGESWKNFILQTQGIAEYLHRMETEEAQ
EMAQMPGRESPPANEASEEAEEPMAVPEDLSASSAHQQNNRGDKACNIKVEARSDEENGL
ACDMNGVEEEECAEDLRVIDASGAKVNGSQPSPEAKAFSSAGGIRLPNGKLKCDICGIIC
IGPNVLMVHKRSHTGERPFQCSQCGASFTQKGNLLRHIKLHSGEKPFKCHLCNYACRRRD
ALTGHLRTHSVGKPHKCAYCGRSYKQRSSLEEHKERCHNYLQCMGLQNSIYTVVKEESNQ
NEQREDLSQTGSDRALVLDRLANNVAKRKSTMPQKFVGDKRLSDLSYDGGAGELIQPHVI
DQAINSAISYLGAESLRPLVQTSPASSSDVGLGSMYPMHKQGAEGHAGTGLSAKDSAAEN
LLLLSKSKSASSEKDGSPSHSGQDSTDTESNNEDRPGGAATGLIYLTNHINAGVRNGVLP
LVKEEQQRQYDAIRASMEMASEGFKVVTADGEQVRAYRCEHCRVLFLDHVMYTIHMGCHG
FRDPFVCNICGHRGQDRYEFSSHMTRGEHHY
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctggaacgaggaagtgcagtggagaggggagggactcagggcgcagctccat
ggggccgccgcggcgctgcgaccttctgcacatggagccggggagagttggaagaacttc
atactgcaaactcaaggaatagcagagtacttgcaccgcatggagacagaggaggcccag
gaaatggcccagatgccaggcagggagagcccccctgccaacgaagcatctgaggaggca
gaggagcccatggccgtcccagaggacctgtcagccagttccgcccaccagcagaacaac
agaggggacaaagcctgtaacattaaagttgaggctcgcagtgatgaggagaatgggctg
gcctgtgacatgaatggcgtggaggaggaggaatgcgcggaagacttgcgcgtgatcgat
gcctcgggcgccaaggtgaacggctcacagccgagccccgaagccaaggccttctcctcg
gccggcggtatccggctgcccaacgggaagctcaagtgcgatatctgtgggataatttgc
attggccccaatgtgttgatggtgcacaagcgaagccacactggagaacgtcctttccag
tgcagccagtgcggtgcctctttcacccagaagggcaacctgctgcgtcacatcaaactc
cattcaggggagaaaccgttcaaatgtcacctgtgtaattatgcctgtcgcaggagggac
gccctcacaggccatttacgcacccactcagttggaaaaccccacaagtgtgcttactgt
gggcggagttacaagcagcgcagttctctcgaggagcacaaggagcgatgtcacaactac
ctccagtgcatgggcctgcagaacagcatctacacagtagtaaaggaagaaagcaaccag
aatgaacagagggaagacttaagccagacgggatctgacagagccttggtgctagacaga
ctagctaataatgtagctaaacgtaagagcactatgccacagaagtttgtgggtgacaaa
cgtctgtcagacctctcctacgatggaggagcaggtgagctgatacagccccacgtcatc
gatcaggccatcaacagcgccatcagctacctgggggccgagtcgctccggcctttggtc
cagacctccccggcctcgtcttctgacgtgggcctcggctccatgtacccgatgcacaag
caaggggccgagggccacgcagggacgggcctgtcggccaaagacagtgcggctgagaac
ctgctgctgctctccaagtccaagtctgcctccagcgagaaggacggctcgcccagccac
agcggccaggactccacagacaccgagagcaacaacgaggaccggcccggcggggcggcg
accggcctcatctacctgaccaaccacatcaacgcgggggtgaggaatggcgtgctgccc
ctggtgaaagaggagcagcagaggcagtacgacgccatccgggccagcatggagatggcc
tccgagggcttcaaagtggtgacagcagacggggagcaggtgagggcgtaccggtgcgaa
cactgccgcgtcctcttcctggaccacgtcatgtacaccattcacatgggctgccacggc
ttcagagaccccttcgtgtgcaacatctgcggccaccggggtcaagatcgatacgagttc
tcctctcacatgacacgaggggagcaccactactga
DBGET
integrated database retrieval system
