Scomber japonicus (chub mackerel): 128372875
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Entry
128372875 CDS
T09718
Symbol
dhx32b
Name
(RefSeq) LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128372875 (dhx32b)
Enzymes [BR:
sjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128372875 (dhx32b)
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128372875 (dhx32b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Motif
Other DBs
NCBI-GeneID:
128372875
NCBI-ProteinID:
XP_053189047
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All DBs
Position
14:complement(14724848..14733028)
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AA seq
751 aa
AA seq
DB search
MKFIPDRLEVHVMAQDNTSLYGEDFFEGKSPCCSDTDALSQGDKEYDDILELNQFDGLPY
SSRFYKLLKERKELPVWTAKSEFMDTLAKGQFVIVSGSAKTGRSSQIPEWCAEFCLSVQF
QHGTVVCTQIHAQQAVDLALRVADEMDVNIGHEVGYSIPLETCCAHDTVLRYCTDDMLLR
EMMADPLLERYSVVVVDQAHQRTVATDVLQGLLKDITLQRPELRVVLLTAVDPSPKQMAH
FTGSTVPLIRLESSGAGEVVYSSRGDSYFCASLRLVLEIHRSEERGDVVVFLVTTQEIDL
ALDILCNEGHSLPPDLGELLPIAVHPSQPGTLPVLGEMETCRTRRVFLTSSPNEDFFWAV
NSISFVVDAGLEKRYVYNPRIRTNSVTIQPISAGQAKSRKQLACPTGKCFCLYPEDRQLP
EEICPHIAESDITSTVLFLKRMEIAGLGHCDFIDRPDPEGLMQALEELDYLAALDNDGNL
SEMGIIMSEFPLEPQMAKTLLASCEFDCVSEVVIIAAMLTARTCFMLPSVDLKPEAVPFQ
MKFQHPEGDHFTLINIYKAFKQCQQDPYCDVEKWCQDFCLNHTALLMADALHTEFIDTLK
RIELPVSVPAFGSRTNTVNIKRALLAGFFMQVARDVDGSGNYFILTHKHVAQIHPLSGYG
AKSPKLRLPEWVLFHEHSFSEDNCLRTVTHITPEEFIQMAPQYFFYNLPSSESKDILQNI
LNGAAQHCQEKKPPTSGEEPQDQTYDRCVIQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttataccagacagactggaagttcacgtgatggcgcaggataataccagttta
tatggagaggacttctttgaggggaaatcaccctgttgttcagacacagacgcgttgagt
caaggagacaaagaatatgatgacattttggagcttaatcagtttgacgggctgccttat
tcctccagattttacaaactcctgaaagaaaggaaagagctgccagtgtggacagcaaag
agtgaattcatggacactttggccaaaggacagtttgttattgtcagtggctctgccaaa
actggaaggagttctcaaattcctgagtggtgcgctgaattctgcctgtcagtccagttc
cagcatggcacagtggtttgtacccagattcatgcgcagcaggctgtagatctcgctttg
agagtggctgatgagatggatgtcaatattggccatgaagttgggtacagcatccctctg
gaaacgtgctgcgctcacgacacagtcctcaggtattgtacagatgacatgctcctgaga
gagatgatggcagaccctttgctcgagcgctacagtgtggtggtggtggaccaggcccac
cagaggaccgtggccactgacgtactccagggtctgctgaaggacatcacccttcagagg
ccagagcttcgtgtggtcctcctcactgcagttgatcctagccccaaacagatggcccac
ttcactgggtccacagtgcctctcattcgcctggagagttcgggcgcaggggaggtggta
tacagcagcagaggtgacagctacttctgtgcctcactccgtctggtgctggagatacac
cgatctgaagagagaggggatgtggtggtgtttctagtgactacacaggagatagatctg
gcccttgacattctgtgtaatgagggccacagcttaccccctgatctgggagagctcctg
cccatcgccgtacaccccagccagcctgggactctaccagtcctcggggagatggagaca
tgccggacccggagagtattcctcacatccagcccaaacgaagacttcttctgggccgtt
aactcaataagctttgtcgtcgatgcagggctggagaaaagatatgtttacaaccccagg
atcaggacaaattcagtcacgattcagccaatcagcgcaggtcaagccaagagtcgcaaa
cagctggcatgtccaacaggcaagtgtttttgtctgtaccccgaggacagacagcttcct
gaggagatatgcccgcacattgcagagtctgacatcacttccactgtactctttttgaag
aggatggagattgcaggactgggccattgtgacttcatcgacagaccagatcctgaaggc
ctgatgcaggctctggaggaactggactacctggcagctctggataatgacggcaacctg
tctgagatgggcatcatcatgtctgaattccccctggagccccaaatggccaaaacactg
ctggcatcgtgcgagtttgactgtgtcagcgaggtggtcatcattgctgccatgctaaca
gctcgaacttgcttcatgcttccctcagtggacttgaagccagaggctgtcccattccag
atgaagttccagcacccagagggagaccacttcactcttattaatatctacaaggcgttt
aaacagtgccagcaggatccatactgtgatgtggagaagtggtgtcaggacttctgtctg
aaccacactgctctgctgatggccgacgctcttcatactgaattcatcgacactctgaag
agaatcgagctgcccgtgtcagtgcctgcctttggttcccgaaccaacaccgtcaacatt
aagagagccctgctggcaggtttcttcatgcaggtggcacgggatgtggacggatcaggg
aactacttcattttgacccacaagcatgtggcacagatccatcctctgtctggttacggc
gccaagagccccaaactgcgactgccagagtgggtgctgttccatgagcactccttctct
gaggataactgcctccgcactgtcacccacataacaccagaagagttcattcagatggca
ccacagtatttcttctacaatctaccatctagtgagagcaaagacatcctccagaacatt
ttgaacggtgcagcacagcactgtcaagagaagaaacctccgacttccggagaggaaccc
caagatcagacttatgatcgttgtgtcatacagtga
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