Scomber japonicus (chub mackerel): 128372892
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Entry
128372892 CDS
T09718
Symbol
exo1
Name
(RefSeq) exonuclease 1
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
128372892 (exo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjo03032
]
128372892 (exo1)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128372892 (exo1)
DNA replication proteins [BR:
sjo03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
128372892 (exo1)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
128372892 (exo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
XPG_I_2
TPR_2
Motif
Other DBs
NCBI-GeneID:
128372892
NCBI-ProteinID:
XP_053189065
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All DBs
Position
14:complement(33241064..33252456)
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AA seq
783 aa
AA seq
DB search
MGIPGLLQFIKEAGEPVNVKKYKGQTVAVDTYCWLHKGAFSCAEKLAKGEPTEQYVWYCM
KFVDMLLNFSVKPVLVFDGRNLPSKKEVEKARRERRETNLQKGRQLLREGKLSEARDCFT
RCVNITPAMAHNLIKTARARGVDCVVAPYEADAQLAYLTKSGLAQAVITEDSDLLAFGCK
KVILKMDKQGNGLEIDQNNLGRCRSLGNIFTEEKFRHMCILSGCDYLASLHGIGLGKACK
LLRLAKDPDILKVIRKMGQYLKMNLVVPEQYIEGFVRANNTFLYQLVFDPVGRKVVPLNS
YPEHVDPSTLNYAGLNVGDEKGLQMALGNLDINTMERIDNFSPDTPMTQPSKPRSKSWND
SPASTASTGPSIWSRSFRPASAAPPQPATSPERPPSTRGKERVISLDGLRLPCRELQVKR
PREDSSISDVDVLQQYSSSSQKRSRSDQQQDKLTPISQPRPRNRFATLLQRRNQEAEEDG
QATCSRFFSNSSSASSLSTKQSAQEDSPQGASPTQEKPSPSTQTNDSDGPDVPSVDTPSP
PETPSTTSPCSASQRRSLFDWSGSSPSTERSRTPKSTSGLGALQQFQYKKETKTQTTSGD
TSPLRLSSTDRNSTDKDDLPDSPPSQDSAYFSQSQPYLISFDKEEAPTYSFQSSYQEDAA
PEINSSKDSEPERSPTQSASVAKKAAMLKSKVSGLSKLKSSSQSPATKVGPLGPARVSGL
RKKSVGSGKKTASTNNENNPGVQATISSLWKNFSFKKDTQKMSPCKKGQPMSPVKDNLLA
SST
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgggaatccctggattgctgcagttcattaaagaagcaggagagcccgtcaatgtgaaa
aaatacaaagggcagacggttgctgtggatacgtactgctggctgcataaaggagctttt
tcatgtgcagaaaagcttgctaaaggagaaccaactgaacagtatgtgtggtactgtatg
aaatttgtggacatgctgttgaacttcagtgtcaaaccagttctggtgtttgatggacgc
aatctgccctcaaaaaaagaagtggagaaggcccgcagagagcgtagagaaaccaacctt
cagaaaggccggcagctcctacgagaaggcaaactctctgaggccagagactgttttacc
cgctgtgtcaacatcactccagccatggctcataaccttattaagactgcgagggcgaga
ggagtggactgtgtcgtggctccatatgaagccgacgctcaattagcttacctcactaag
tctggtttggcccaggccgtcatcacggaagactctgacctgctggcattcggctgtaaa
aaggtgattctcaaaatggataaacagggaaacggcctggagatagatcagaacaacctg
ggccgctgtcgctctctgggcaacattttcactgaagaaaagttccgccacatgtgcatc
ctctccggctgcgactacctggcctccctgcacggcatcggcctgggcaaggcctgcaag
ctgctgcggctggccaaagaccccgatatcctcaaggtaatcagaaagatgggtcagtac
ttgaagatgaacctagtggtgcctgagcagtacatcgagggcttcgtcagagccaacaac
accttcctctaccagctggtgtttgatcctgtcggcaggaaagttgtacccctcaactcc
tacccagagcatgttgacccctccaccctcaactacgccggcctcaatgtaggagatgaa
aaaggcctgcagatggctttgggaaaccttgacatcaacacaatggagaggatagacaac
ttcagcccagatacacccatgacacagccatccaaaccccgcagtaaaagctggaacgat
tcccctgcctccactgcctccactgggcccagtatctggagccgaagctttaggcctgcc
tctgctgccccgccccagcctgctacctccccagaaaggcctccctctaccagggggaag
gagagagtcatcagcctggatggtctgaggctcccctgcagagagctgcaagtgaagaga
cccagagaggactccagtatatcagacgtggacgttctgcaacagtactcctcctccagt
cagaagagatccaggtcagaccagcagcaggacaagctgacgccaatcagtcagccccgg
ccacgtaatcgctttgccaccctgctgcagaggaggaaccaggaagctgaggaggacggc
caggccacatgcagcagattcttcagcaactctagttcagcatccagtctcagcactaag
cagtctgctcaggaggattcacctcagggtgcaagtcccactcaggagaagccctctccc
agcacccagaccaatgacagcgacggtcccgacgtcccatctgtggacacccccagccca
cctgaaacccccagcaccacatccccctgttcagccagtcagcgtcgcagtctgtttgat
tggtcgggtagttccccctcaactgagcgatcaagaacgccaaagtccacctcaggcctt
ggcgccctgcagcagtttcagtataagaaggagacaaagacacagacaacctctggagac
acgtcacccctgcgtctgtcctccactgacaggaactccactgacaaggatgacctccca
gactcccctccctcccaggacagcgcatacttctcccagtcccagccttacctcatctcc
ttcgacaaagaggaagcccccacctacagcttccagtcctcctaccaagaggatgctgca
cccgaaattaattcaagcaaagattcagagccagagcgtagtcccacacagtcagcatca
gtggctaagaaagccgctatgctcaaatcaaaggtttcaggtctgtccaagctcaaatcc
agtagtcagagtccagccacaaaggttgggccgctgggcccggccagggtcagcgggctt
aggaagaagtctgtgggatctgggaagaaaacagcttccaccaataacgaaaacaacccc
ggagtccaggccaccatcagcagcctctggaagaacttcagcttcaaaaaagacactcag
aagatgagtccctgtaagaaaggacagcccatgtctccagtcaaagacaacctgctggcc
agctccacttag
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