Scomber japonicus (chub mackerel): 128372942
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Entry
128372942 CDS
T09718
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128372942 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128372942 (lrit1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
ig
fn3
Ig_2
LRR_14
LRR_5
LRR_EndoS
RNA_pol_Rpb1_2
Motif
Other DBs
NCBI-GeneID:
128372942
NCBI-ProteinID:
XP_053189126
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All DBs
Position
14:complement(17468428..17472079)
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AA seq
651 aa
AA seq
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MFLVLLLGLYVATGQLVSPVSSCPSQCSCFYHNLSDGSKARSVICNDPEISLVPVGFPVD
TSKLRIEKTAIQRIPSEVFNYLSSLEFLWMSFNTLSALNPDSFRGLLNLEELRLDGNALT
AFPWESLMDMPSLRLLDLHNNQLTSLPAEATSYIKNLTYLDLSSNSLLTLPTEVLSTWLA
AKPVQGPESSKMILGLHDNPWVCDCRLYELVQFQKSPTLSVAFIDTRLRCSAPESVSGVL
FSDAELRRCQLPRIHTAVARVRSAVGNNVLLRCGTIGVPIPDLTWRRADGRVLNGTVQQE
TSKDGITWSILSVPAVSFRDSGKYICKGTNYAGNAEAVISLIVSNSPKPEGNQTSNDKKA
KVKKPNPMGKAAYQEKLVARYVAPTSTPSSPPALDPGLPPGLAPDPGPASYSLADRATPG
PATSSNPDALLDLEKTNLSNLAANTSSLQQDPDRVVRSVKVVGDTDNTIYLNWRAPKAKN
TTAFSVLYAVFGERDMRKINVGAGQNRVTINGLVPRTKYIACVCVRGLIPKKEQCVIFST
DEAASATGTQRLINVIVITVACIIAVPLTVIVCCGALKRRIQKYWGKKSKDIQDSYVTFE
TLSPGTKAKGLEGEYLNRQNPEESNRLLSARSSLDSEATAKIEGQPNEYFC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcgtcctgctcctggggctctacgtggccacaggtcaacttgtctccccagtg
agctcctgtccgtcgcagtgcagctgtttttaccacaacctgagtgatggatcaaaggcc
aggagcgtgatttgcaatgatcccgaaatatctcttgtgcctgtcgggttccctgttgac
acatccaagctacggattgagaagacggccatccagcggataccaagcgaagtcttcaac
tacctctccagtctggaattcctatggatgtctttcaacaccctgtccgccttgaacccg
gacagtttccggggacttctcaacctggaagagcttcgcttggacgggaacgccctcacc
gcctttccttgggagtctctcatggatatgcccagcctgagactgctcgatttgcacaac
aaccagctcacctcgctgcccgcggaggccacctcttacatcaaaaacctcacatacctg
gatctgtccagcaacagcctgctgaccctgccaaccgaggtgctgtccacctggcttgcg
gcaaaacctgtgcaaggaccagagagctccaaaatgatacttggtctccatgacaacccc
tgggtatgtgattgtcgtctctatgagctggtccagttccagaagtctccgactctctct
gtggcgttcattgacacaaggctgcggtgttcagccccagagagtgtgtcgggggtcttg
ttcagtgatgcagagctgcggcgctgtcagctgccacgtatccacacagctgtggcacga
gtcaggagcgctgttggaaacaatgtgttactccggtgtgggactattggagtccccatc
ccagacctgacatggcgcagggcggatggacgggtcctgaatggaacagtccagcaggaa
acctccaaggatggaatcacttggtccatcctcagtgtcccagctgtgtccttccgtgat
tcaggaaaatacatctgcaagggcaccaactatgcagggaacgctgaggcggtcatttct
ctcattgtctctaattcaccaaaacctgaggggaaccaaaccagcaacgacaagaaagcc
aaagtcaagaaacccaatccgatgggcaaagctgcttaccaggagaaacttgtggccaga
tatgtggctccaacctccactccttcatccccacctgcactggatcctggccttccacct
ggcctagctcctgatcctggaccagccagctacagcctagctgacagagccacccctggg
cctgccacctcctccaatccagatgcactgctggatctggagaaaacaaatctaagtaac
ctagcagccaatacctcgtcgctgcagcaggacccagacagggtggtgcgctcagtaaag
gtggtaggggacacagacaatacaatttatctgaactggagagcccctaaggccaagaac
acaacagcatttagtgtgctgtatgctgtgttcggagagagggacatgaggaagataaat
gttggggcggggcagaatcgtgtaaccatcaatgggctggtgcccaggaccaagtacatt
gcctgtgtgtgtgtgagggggctgatccccaagaaggagcagtgtgtcatattttccacc
gatgaagcagccagtgctactggcacccaaaggctcattaatgtgattgtgatcacagtg
gcctgtatcatcgcagtcccactcactgtcatcgtgtgctgtggggcgctgaagagacgc
attcagaagtactggggaaagaagtccaaggacatccaagattcatatgtgacctttgag
acactgtcgcccggcacaaaggccaaagggctcgagggcgagtatttgaacagacagaac
ccggaggagtccaacaggctcctatcagcccgctccagcctggattctgaggccacagct
aaaatagagggacagcctaatgagtacttctgctga
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