Scomber japonicus (chub mackerel): 128372962
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Entry
128372962 CDS
T09718
Name
(RefSeq) ras and Rab interactor 2-like
KO
K23687
Ras and Rab interactor 2/3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128372962
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
128372962
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
RA_2
SH2
RA_3
Lpg0393_VPS9
FERM_f0
RelB
TUG-UBL1
SH2_1
Motif
Other DBs
NCBI-GeneID:
128372962
NCBI-ProteinID:
XP_053189147
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All DBs
Position
14:complement(29747190..29796685)
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AA seq
1119 aa
AA seq
DB search
MSSSAITQPCKQERKGSFFKLIDSFAWEIGTLKKEMGKKTEPAEGDHKTDTLLGLGEEVG
GLFLQASPCAGIGAGPAGARDSGYDSLHRRLSVLDRLVNTHAVWLQLGLNHQDATRILKS
QPTGTFVVRKSTSLQRKVISLRMDKDSTVPVKDFPVRESQYTFSLEGSGLSFADLFRLVA
FCCISRDVLPFTLKLPEPIASARTSADLEEVAKLGAGFWDRKLCRSRKSSASVSATAVPD
RPPPPAQRPASVATTPGRPRLQTRTPSELECCQSNGALCFINPLFIKVHQPDSDQSTNSN
PSSTAKKGLREETDSNNSSPETSNKYIQLSCDDSPEVCLSEVDDSKKSSLSNLQGNTELQ
DNKSQNRSSQKQSDTDTVSRSPPPRPPPPRLVPQRSGPPVRQRSMPEKISWINISKEKVE
ERERGSSLLSRLGSSLSISPSSSPPKRLSISSPISIPRPSIPLSLSSLSSSPRRPKASPS
SSQEDAQCHLALEDKTIEEALSKAKRFQRNATTTTSEHSYSPPDPSLLTTNKPAKVREGE
EEAGVECSGGGQRLSDMSLSTDSSDSLEFSQSSAFFLPPLHDPNPPTVDDFNIHLPLSLP
PRHLPYSSMEEDDDDEDDEDEEETDYGVSLESDQDQDQDLTMVPPGHRTKRRPSASALIL
QKALRGHLRKMSGVFNSLLTPEKRAIRKVLELSRDKSSYFGCLVQDYLSYMSEAAGNQAG
QGYASGLELLQTLRQFITQMKSYLRQSSELEPPIESLIPEDQIDGVLEKAMHKCVLKPLK
PVVSVALQEFQVRSGAWQELKENLSLAKARQPQDMGVADALPPDPVAIEKIRHKFHTMCK
LYSPEKKVTMLLRVCKLIYTIMEDNSGRLYGADDFLPMLTYVLAQCDMPQLDNEILYMME
LLDPSLLHGEGGYYLTSAYGAMSLIRNFQEEQAARVLSSETRDTLHQWHRRRTTQRSAPS
IDDFQNYLRVALQELDSGCTAKTLQVRPYATVEEVCQLCALKFKVSDPENYGLFLLIEGS
SQQLALDTHPQKIKAELHSRQQEAPFHFVFRRIANSDFSSSAPNDSAPNLNNLTVTSDPQ
SNQDDFSTDMSTSPSQPGLRPSLSLSLPSSNLNGNSISI
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagtgccatcactcaaccctgcaagcaggagaggaaaggcagtttcttcaag
ctgattgactcgttcgcctgggaaattggcactttgaagaaggagatgggaaaaaagaca
gagccagcagaaggagaccacaagactgatacactccttgggctaggtgaagaggtgggg
ggtctcttcctgcaggcttcaccgtgcgctgggatcggggcaggcccggccggagccaga
gattcgggctacgactccctccaccggcggctgagcgttttggaccgactggtgaacacg
cacgctgtgtggctccagctgggactcaaccatcaggacgccacccgtatactgaagagc
caacccacagggacatttgtggtgaggaagtcaaccagcctccagagaaaggtcatctct
ctacgcatggacaaagactccaccgtccctgtcaaagacttccctgtcagggagagccag
tacactttctctctggagggatcaggcctaagcttcgcagatctgtttcgtctggtggct
ttctgctgcatcagcagggatgtgttgcccttcactctgaagctcccagaacccattgct
tcagccagaacctctgctgatctcgaggaggttgctaaacttggagcaggcttctgggac
agaaagttgtgccgcagtaggaagagttcagcctcggtgtccgcaacagctgttcccgat
aggccacccccccctgcccagagacctgcctctgtggcaaccaccccagggcgccctcgg
cttcaaactcgcaccccatctgagcttgagtgttgccagtccaacggagcactttgtttc
atcaaccccctcttcataaaggttcaccaaccagacagtgaccagagcaccaactccaat
ccttctagcacagcaaagaagggcctgagggaggaaaccgatagcaacaacagcagccca
gaaaccagcaacaagtacattcaactgtcttgtgacgacagccctgaggtctgtctctca
gaggtcgatgacagcaagaagtcaagcctaagcaacctgcagggaaacacagagctacaa
gacaataagagtcaaaacagaagcagccagaagcaaagtgatacagatactgtgtcacgg
tccccaccccctcgccctcccccacctcgtttggtgccacaacgctctggccctcctgtc
cgacagcgcagcatgcctgagaagatctcctggatcaacatctccaaggagaaggtggag
gagagggagaggggcagcagcctcctttctcgtctgggctcctcactaagcatcagccct
tcatcctccccgcctaaaagactgagcatcagctcccccatatctatcccccggccctcc
ataccactctctctatcatctctgtcctcctctccacgtcggcccaaagcctcaccatca
tccagccaggaggatgctcagtgccacctagcactagaggacaagactattgaggaggcc
ctcagtaaggccaaacggtttcagcggaatgctaccacaaccacctctgaacactcctac
agtcctccagacccttctctgttgacaaccaacaaaccagcaaaggtgcgagaaggagaa
gaagaagcaggagtggaatgcagtgggggtggacagcgactgagcgacatgagcctttcc
acagattcctctgactctctggaattctctcagtcctctgccttcttccttcctcctctc
catgaccccaacccccccactgtggatgacttcaacatccacttacccctctccctcccc
ccacgccacctgccttactccagcatggaggaagacgacgacgatgaggacgatgaggac
gaagaagagaccgactatggtgtcagcctggagagtgaccaggaccaagaccaggacctg
accatggtgccgccggggcaccgcacaaagcgtcgccccagtgccagtgctttgatcctc
cagaaagctctgcgtgggcacctgcgcaagatgagcggcgttttcaactcgctgttgaca
cctgagaagagggcgatccgcaaggtgctggagctgtccagggacaaaagctcgtacttc
ggctgcctggtgcaggactatctgagttacatgagtgaggctgcaggcaaccaggctggg
cagggctacgcctctgggctggagctgctgcagactctccgccagtttatcacccagatg
aagagctacctgcgacagagctccgagctggagccaccaattgaaagcctaatccctgaa
gaccagattgacggagtcctggagaaggccatgcacaagtgcgtcctgaagcccctcaag
ccggtggtgagcgtggccctgcaggagttccaggtgcgcagcggggcgtggcaggagctg
aaggagaacctttcgctggcgaaggctcggcagccacaggacatgggtgtggccgacgcg
ctgccccccgaccccgtggccatagagaagattaggcacaagttccacaccatgtgtaag
ctctactcgccggaaaagaaggtcaccatgctgctgagggtctgcaaactcatctacact
atcatggaagacaattcaggtcgtctgtacggtgctgatgacttcctgcccatgttgacc
tacgtgttggcccagtgtgacatgcctcagctggacaatgagatactttacatgatggag
ctgctggacccttcactgcttcacggagaaggtggttactacctgaccagcgcttacgga
gcaatgtccctaatcagaaacttccaggaggagcaggcagccagggtgctgagctctgag
accagagatacgctccaccagtggcaccgccgacgcaccacccagcgatctgcaccgtcc
attgatgacttccagaactacctgcgggtggcactgcaggagctggacagtggctgtact
gcaaagactttacaggtccgaccttacgccaccgtggaggaggtgtgccagctgtgcgct
cttaagttcaaagtgtcggaccctgagaactacggcctgttccttctaatagaaggcagc
agccagcagctggctctggacacccaccctcagaagatcaaggccgagctccacagccgc
cagcaggaagctcccttccattttgtcttcagacgcatagcaaacagcgacttctcgtca
tcagctcccaacgattctgcacccaacctcaataacctcactgtgacctctgacccccag
tccaaccaagacgacttcagcacggacatgtcaacctccccctcccagcccggcctcagg
ccgagtctgagcctcagcctgcctagcagcaaccttaatggaaactccatatctatatga
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