Scomber japonicus (chub mackerel): 128372975
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Entry
128372975 CDS
T09718
Name
(RefSeq) vinculin-like isoform X1
KO
K05700
vinculin
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04510
Focal adhesion
sjo04517
IgSF CAM signaling
sjo04518
Integrin signaling
sjo04519
Cadherin signaling
sjo04520
Adherens junction
sjo04810
Regulation of actin cytoskeleton
sjo04820
Cytoskeleton in muscle cells
sjo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128372975
04518 Integrin signaling
128372975
04519 Cadherin signaling
128372975
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128372975
04520 Adherens junction
128372975
09142 Cell motility
04820 Cytoskeleton in muscle cells
128372975
04810 Regulation of actin cytoskeleton
128372975
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128372975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128372975
04147 Exosome [BR:
sjo04147
]
128372975
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128372975
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128372975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
HrpD6
Motif
Other DBs
NCBI-GeneID:
128372975
NCBI-ProteinID:
XP_053189159
LinkDB
All DBs
Position
14:19558172..19580361
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AA seq
1066 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTVPVAAVQAAVSNLVRVGKE
TVQTTEDQLMKRDMPPAFIKVENSSSKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLAVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLINSMNTVKELLPVLISAVKIFVATKSSRGAGVEEAERNRKFTFEKMSAE
IHEIIRVLQLTTWDEDAWANKDMEALKRSLALIESKMAQAKSWLRDPHAQPGDPGEVALR
VILDEAGKVGELCAGKERKDILATAKALGQMTDQIADLRVRGQGPTPGCMQRAGQCSQGL
DLLFGKVDSAARKLEALINAKQAIARRLDAAQAWLADPNGGPEGEENIRALLAEAKRIAD
LCEDPKERDDILRSISEIAGLTARLVELRKQGKGDSPEARALAKQIGAALLTLQSKINRA
VANMRPAKPAVTLEGKMEQALRWVNNPGVDDRGVGQAAIRGMVGEGRRLAGGLLGPYRQD
MAGRCDRTEALMTSLADMAGRGEAEAPHARATAAQLQDSLKDLRQHMQEVMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNREEVFEERAGNFETHAGRLGATAEKAAAVGTGNKSTVEG
IHAAVKNARELTPQVTSAAQILLKNPGNKAAYEHFDTMKNQWIDNIERLTGLVDEAIDTK
SLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPRFR
DTVKHASDILSHTISPMVMDAKAVAGNIQDKALQKAYLDSCLRILGAVGKVREAFQPQEL
DFPPPPPDLDQLHVSDEQAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVLSEPMMV
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacaccaagacgatcgagagtatcctggagccggtggcccagcagatc
tctcacctggtcatcatgcacgaggagggggaggtggacgggaaagccatcccggatctg
acggtaccggtggctgcggtgcaggcggcagtcagcaaccttgtgcgggttgggaaggaa
actgttcaaaccaccgaggaccagttaatgaagagagacatgcctcctgccttcatcaag
gtggagaattcatcttctaaactcgtccaggcagctcagatgctgaaggcagatccgtac
tctgtccccgcacgagattacctgatcgatggatccagagggatattgtctggaacttcg
gacctgctccttacttttgatgaagccgaggtgcgtaagattatacgtgtgtgtaaaggt
atcctagagtatctggcggtagctgaagtggtagaaacaatggaggacctcatcacctac
accaagaacctgggaccagggatgaccaaaatgtcaaagatgattgaggagaggcagcaa
gagctgacgcaccaagagcatcgacagatgctcatcaactccatgaacactgtcaaagag
ctgcttcctgttcttatatcagctgtaaagatttttgtcgcaaccaagagcagtcgaggt
gccggtgtggaagaggccgagaggaacagaaagtttacctttgaaaagatgagtgctgaa
atccacgagatcataagagttttacagctcaccacatgggatgaagacgcctgggctaat
aaggatatggaggctttgaagagatctctggctttgattgagtcaaaaatggcacaagct
aaaagctggctcagagacccccacgcacagccaggagaccccggtgaggttgcattgcgt
gtgatactggatgaggctggtaaggtgggcgagctgtgtgctggaaaggagaggaaggat
atactggcaaccgctaaggctctcggacaaatgaccgaccagatcgcagatcttcgagtc
agaggccagggtccgaccccagggtgtatgcagcgcgcaggccaatgctcacagggctta
gacttgttatttggcaaagtggacagtgctgctcgcaaactggaggctctaatcaatgcc
aagcaagccattgccaggaggctggatgctgcacaggcttggttggctgatcctaatggc
ggtcctgagggtgaggagaacatcagagcgttactagcagaggccaaacgcattgcagat
ctatgcgaagaccccaaagagcgggacgacatcttacgctccatcagtgagatcgcaggc
ctcaccgctaggctcgtggagctgcgcaaacagggtaaaggcgacagccccgaggcccgt
gcattggcaaagcagattggggcagcgctgctcaccctgcagtccaaaatcaaccgggct
gtggccaacatgagaccagccaagcctgctgtcactttagagggcaagatggagcaagcc
ctccgctgggtgaacaaccctggagtggacgacagaggagtgggtcaggcagcgatcaga
ggaatggttggagaagggaggaggcttgctggaggcctgttaggcccttatcgccaggat
atggctggacgatgcgaccgaacagaggccctaatgacatctttggcagacatggctggc
aggggtgaagctgaggcgcctcatgcacgagcgacagccgcacagctacaggacagcctc
aaggacctgaggcagcatatgcaggaggtgatgacccaggaagtatcagatgttttcagt
gacaccaccacccccatcaaactgctggctgtggctgcaactgctcctcctgatgccccc
aacagagaggaggtttttgaggagcgtgcagggaactttgagacccacgcaggtcgatta
ggtgcaaccgcagagaaggcggctgccgtgggaacaggcaataagagtacagtagaggga
attcacgctgctgttaaaaatgcccgggagctcacaccacaggtaacctccgctgctcag
atcttgttgaagaatcccggaaacaaagcggcatatgagcattttgacaccatgaagaat
cagtggatcgacaacattgagagactcacaggtctggtggatgaggccatagacaccaag
tctctgttagatgcctctgaggaggccataaagaaagacatcgacaagtgccgagttgcc
atggcaaatgttcaaccccaaatgcttgttgccggagcaacaagcatagcaagacgagct
aatcgggtcctgttggtggctaagagggaagtggagaactctgaagatccacggttcaga
gacaccgtgaaacatgcgtcagacatcctctcacataccatctcacccatggtgatggat
gctaaggcggtggctgggaacatacaagataaagctctgcagaaggcctatctggactcc
tgtctgaggattctgggtgcagtcggaaaagtcagagaagccttccaacctcaggagctc
gacttcccgcctccacctcctgaccttgaccagctgcatgttagcgacgagcaggcaccg
cccaaaccacccctgccagagggcgaggtgccaccccctcggccccctcctccagaggaa
aaggatgaggagttcccagagcagaaggctggagaggtgctcagtgagcccatgatggtg
gcagccagacagctgcatgatgaggctcgcaagtggtccagcaagggtaacgacatcatt
gcagcagccaagcggatggctctgctgatggcagaaatgtctcggctggtgcgtggtggc
agtgggaacaaacgagcgctgattcaatgcgccaaggacatcgccaaggcctcggacgag
gtgacaagactggctaaagaagtggccaaacagtgcactgacagacgcatcaggactaac
ctactgcaggtgtgtgagcggatccctactatcagtactcagctgaagatcctctctact
gttaaagctactatgctgggacgaaccaacattagtgaggaggagtcagaacaggccact
gagatgttggtccacaacgcccagaatctgatgcagtcggtgaaggagactgtccgagaa
gcagaagcagcttccatcaagatccgcacagatgcaggattcaccctccgctgggtacgc
aagaccccctggtaccaataa
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integrated database retrieval system
