Scomber japonicus (chub mackerel): 128373149
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Entry
128373149 CDS
T09718
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
128373149 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128373149 (kcnma1a)
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
128373149 (kcnma1a)
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Paralog
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Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
128373149
NCBI-ProteinID:
XP_053189390
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Position
14:complement(16561361..16693890)
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AA seq
1200 aa
AA seq
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MEDVVIPFSSEVPCDNNGQRMWWAFLASSMVTFFGGLFIILLWRTLKYMWTVCCHCNIKP
KEVQKVNNPAINQATDAPKGDEKEEVPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVF
ALSIGALGIYFIDSSDPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLE
VNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCS
IFISTWLTAAGFIHLVENSGDPWENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLG
RLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFL
KDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESAD
ACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEG
DDAICLAELKAGFIAQSCLAQGLSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEY
LSSAFVGLSFPTICELCYVKLKLLLIAIEYKSEQRESRSRKRILINPGNHVKMQEGTLGF
FIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKRLIYFEDEHPSTLSPKKKQRNGGMR
NSPNCSPKMMRHDPLLIPGNEQIENMDMNVKRYDSTGMFHWCPSKEIEKVILTRSEASMT
VLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHYHELKPIVFVGSLDYLRREWETLHNF
PKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIEDASLQDKECILASLNIKSMQFD
DSIGVLQANSQGFTPPGMDRSSPDSSPVHGFVRQASVTTGSNIPIITELAKPGKLLPLVS
LSQEKKSGTNIQMITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMS
ATYFNDNILTLIRTLVTGGATPELEALLAEENALRGGYSTPQTLANRDRCRVAQLALYDG
PFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHMSVPSPCTKRYVITNPPYEFELVP
TDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIPPSNRQNRSSKTREARDKQ
NATRMNRMGQEKKWFTDEPENAYPRNIQIKPMSTHMANQVNQYKSTSSLIPPIREVEDEC
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgttgtcatcccgttctcgtccgaggtgccctgcgacaataatggacagcgc
atgtggtgggcattcctcgcctcctccatggtgacgttttttgggggtctcttcatcatc
ctgctatggagaaccctgaaatatatgtggactgtttgctgccattgcaacatcaaaccc
aaggaggttcagaaggtgaacaaccccgccatcaatcaggcaacagacgcaccaaaaggt
gatgagaaggaggaggtcccagccagcgaggtgggatggatgacttcagtcaaagattgg
gctggcgtcatgatctctgctcagacgctcactggcagagttctggtggtgttagtcttt
gcactcagcatcggggcccttggaatatactttatagattcttccgaccctatagaatcc
tgccagaacttctacaaagattttacgttacagatcgatatggccttcaacgtcttcttc
cttctttactttggtctgcggtttatagcagccaatgataagctgtggttctggctggag
gtcaactcagtggtcgacttcttcactgttcctcctgtgtttgtttctgtctacttaaac
agaagctggctcggtttaagattcctgagagccctaagattgatacagttctcggaaatc
ttacagtttttgaatatcttgaaaacaagcaattccatcaagctggtgaacctgtgttcc
atcttcataagcacatggcttacagctgctggatttatacatttggtggaaaactcaggg
gatccttgggaaaactttcaaaactcccaatctctatcgtattgggaatgtgtctacttg
ctgatggtgacaatgtccacagtgggctacggggatgtctatgcaaaaaccaccttggga
cgcctgttcatggtcttcttcatccttggtggtttggccatgtttgccagctacgtccct
gaaatcatagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaat
gggagaaagcatattgtggtctgtggtcatattaccctcgaaagtgtctccaacttcctc
aaagacttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataat
atttcccctaatcttgagctggaagccttgttcaaacggcattttacccaagtagagttc
taccagggatctgttctcaaccctcacgatctggccagagtgaagatcgagtcagcagat
gcctgcttaatccttgccaataaatactgtgcagatcctgatgctgaagacgcctccaac
atcatgagagtcatctctatcaagaactaccatcccaagatcagaataatcacgcagatg
ttgcaatatcacaataaggcccatctgctgaacattccgagttggaattggaaggagggt
gacgatgctatctgcctggcggagctgaaggcgggcttcattgcccagagctgtctggct
cagggcctgtcaaccatgctggccaacctcttctccatgaggtccttcattgagattgag
gaggacacatggcagaagtattaccttgaaggagtggctaatgagatgtacacagagtat
ttgtccagtgcctttgtgggcctctccttccccactatctgcgagctgtgttacgtgaag
ctgaagctgttgcttattgccatcgaatacaagtctgagcagagagagagcagaagccga
aagcgcattctcattaacccgggcaaccatgtcaagatgcaggagggaacactgggattc
tttatcgccagtgatgccaaagaagtaaagagagcctttttctactgcaaagcttgtcat
gatgacatcacagaccccaaacggatcaaaaagtgtggctgcaaacgactgatttatttc
gaagacgagcatccatcaactctctcacccaaaaaaaagcagcgcaatggagggatgcga
aactcacctaactgctcgcccaaaatgatgagacatgacccccttctaatccctggaaat
gagcaaatcgaaaacatggacatgaacgtgaagaggtatgactcgacagggatgtttcac
tggtgcccatcaaaggagatcgaaaaagtcatcctgacccggagtgaagcctccatgacg
gtgctgagcggccatgtagtggtctgtatatttggggatgtcacgtctgctttagtgggg
ctgcgaaacttggtgatgcctttaagagccagtaacttccattaccatgaattgaagcct
atagtgtttgtgggctctctggactatctgcgaagagaatgggaaactttacacaacttc
cccaaggtgtccatcttacctggtacaccattaagtcgggcagatttaagggctgtcaac
atcaacctctgcgacatgtgcgtaatactgtcagccaatcagaacaatatcgaagatgcc
tcactgcaggataaggaatgcatcttggcatcactcaacatcaagtctatgcagtttgat
gacagcattggggtcttacaggctaattcccaaggtttcacgcctcctggaatggacagg
tcatctccagacagcagtccagtacatggcttcgtgcggcaggcttccgtcactaccgga
tccaacatccccatcatcacagagctagctaaacctggcaaactactgccattggtttca
ctcagtcaggaaaaaaaaagtggaaccaacatacaaatgataacagagctggtgaacgac
tcaaacgttcagttcctggaccaagatgatgatgacgacccagacacagagctgtacctc
actcagcccttcgcctgcggcactgccttcgctgtcagtgtactcgactccctgatgagc
gcgacatacttcaacgacaacatcctcacgctgattcggacgctggtcacagggggagcc
acaccagagctggaggctctgttggctgaagagaacgctctcagaggaggctacagcaca
ccgcagacactagccaacagagacaggtgtcgtgtcgcccagctagccctctacgatggg
ccatttgccgacttgggggatggcggctgctacggggatttattctgtaaagcactgaag
acgtacaacatgctgtgttttggaatctacagattaagagacgctcatatgagtgtacca
agcccgtgtacaaaacgatacgtgatcacaaacccaccttatgagtttgagctggtgccc
acagacctgatcttctgcctcatgcagtttgaccacaacgcgggccagtcccgaacaagc
ttgtcccactcttcccactcctctcattcctccagcaaaaagagctcctccgttcattca
atcccaccctccaaccggcagaaccgtagtagtaagacccgggaggcccgcgacaaacag
aatgcaacaaggatgaatagaatgggccaagaaaagaaatggtttacagatgaaccggaa
aatgcctacccacggaacattcagatcaagcccatgagcactcacatggccaaccaagtc
aaccaatacaaatccactagtagtctgattccaccaatcagagaagttgaagacgaatgc
tga
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integrated database retrieval system
