Scomber japonicus (chub mackerel): 128373178
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Entry
128373178 CDS
T09718
Symbol
rtn4a
Name
(RefSeq) reticulon-4a isoform X1
KO
K20720
reticulon-4
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128373178 (rtn4a)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128373178 (rtn4a)
Membrane trafficking [BR:
sjo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
128373178 (rtn4a)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128373178 (rtn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
Motif
Other DBs
NCBI-GeneID:
128373178
NCBI-ProteinID:
XP_053189444
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All DBs
Position
14:2188556..2230014
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AA seq
1034 aa
AA seq
DB search
MADSDQFVSSSSSPFFTDEVHHYQAEPEPEQHRPDKDLFSMDDIVDLVGGAQDALERHIA
EDESTEVPFTHAEESVKFTEPEPVTVLEPEPEPEPEPVPVSEVETLLPDSSSSSIVHDTP
LIEPEVIAPKAEPESTITTSSSSTILPPPLEPEPEPESRALPALQPRKAAPSPAEAAQQP
AVTEEAPAPASYVPSPSKAQPHPLMQFPTAFGQKGDSPAPISPLSPLHSPDSLEELSLTE
SPNQPLSSGSAGPLGSFSTEPPTIHSKDMPWEDEEVDSGPGRSKNKEDLPDPLGGPYLSL
GKDPGPHNPCEDSGVSFSPEEKLVSSDRSSTGPSPVTPQMMVPESHLASSNPTEHWDSTY
LSSQDNSKVSMDSFSKDTAPISSSRYEADLHGNQSDEDDDLMYEVKKTSNPFEGYSPLAD
SGYSQFGDSKADSSATKMSESPTPDLVQYGQSGETQYGQSGETQDSPPSFLDDEKTFETG
KMGADSLMQSVSQFSSGLKDDDDDDDEEEEEDSALPPSLPDILKSSPLNPEKIDSGSSEG
SPEEQSPILERRMMESPNPPINLSANNPFAFDAKVSLLKEMAEQMEVKASDKVKVEDDKS
FGAFDLVKEAEETTPTKVKEEEPVKIEQKDWFSSHDSLKMTEKFEPLDFQSKKSPAEDSD
SESPTADSLSPVLEAMAKNPAIFQVETEKTDLKMEDDEPEVAEEVSEHEVSSEEFEFIER
PPRGVIDEFLEALDTSKFASSKVPELAMDDDLSFEPKDLAPVSPAKVSPSPPEVEEEAAS
QSSYRLLTQASPQKSKAELEKLDIQQPPPQVSPLVHSPVRKPEETVAKKSVEGGKVFKMP
NVNIKAVVDLLYWRDVKTTGVVFGAILLLLLSLTVCSIVSVCSYIGLALLSVTICFRIYK
GILQAIQKSDEGHPFKQYLDHEVALSEDMVHKYSDIVLARLNKTIGELRRLFLVEDLVDS
IKFAVLMWILTYVGALFNGLTIVILTVVGVFSCPIVYEKHQAQIDHYVALVNNQVKDVVG
KIQAKVPGMKRKTE
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagcgaccagttcgtctcttccagcagctctccgttcttcacggatgaagtg
caccactaccaggccgaaccggaaccggagcagcaccggcccgacaaagacctcttcagc
atggatgatatagtggatctagtcggcggagctcaggacgctttggaaaggcacatagcg
gaggatgagagcactgaagtcccatttactcacgcagaagagtcggtgaagttcacggag
ccagagccggtgacggtgctggagccagagccagaaccagaaccggagcctgtgccggtg
tcagaggtggagacactactccctgactcctccagctcgtctattgtgcatgacacgcct
ttaatcgagcctgaagtcattgcacctaaagcggaaccagagagcaccatcactaccagc
agcagcagcaccatcctcccacctccactagaaccggagccggagccagagagccgagcc
ctccccgcgctgcagccccggaaagcagcgccatccccggcagaggctgcacagcaacct
gcggtgacggaggaagcaccggctcctgcatcatatgtaccttctccttctaaagctcag
cctcatcctctgatgcaattccctacagcatttgggcagaagggtgattcccctgctccc
atctctcctctctccccacttcactcccccgactctttggaggagctctctctgaccgag
agtcccaatcagcccctttcttcaggatctgctggacccctgggctccttctctactgaa
ccccccactattcactccaaggacatgccttgggaggatgaagaggttgactctggaccg
ggtcgtagtaagaataaggaagacctccctgatccgttaggtggtccttacctgagttta
gggaaagacccagggcctcataatccgtgtgaagacagtggagtttccttttcacctgag
gagaagctggttagctcagacaggtcctccactggcccctcccctgtgaccccccagatg
atggtccctgagtctcaccttgcctcctctaacccaacagagcactgggattcaacatac
ctatcatctcaagacaactccaaggtctccatggattccttctccaaggatacagctccc
attagttcctccaggtacgaggcagacctgcacggcaaccagtccgatgaggatgatgac
ttgatgtacgaggtgaagaagactagtaacccatttgagggttattccccactggcagac
agcggctactcccagtttggagactccaaggctgacagcagtgccactaaaatgtccgag
agtcccactccagatctggtccagtacgggcaatctggagaaacccagtacgggcaatct
ggagaaacccaggacagccctccatctttcttagacgacgagaaaacatttgagacaggc
aagatgggcgctgactcactcatgcagtcagtgagtcagttctcttctggtctgaaagat
gatgatgatgatgatgatgaagaggaagaggaagattctgctctgccaccatcacttcca
gacatcctgaagtcttccccactcaaccctgagaaaatcgactccggctcctcagaggga
agcccggaggagcagagccctattcttgagaggaggatgatggagtcgcccaaccctcca
attaatctgtcggctaacaacccgtttgcttttgatgctaaagtgtccctgctgaaggag
atggcagagcagatggaggtgaaggcgtccgacaaagtaaaggtcgaagacgacaaaagc
tttggtgcattcgatcttgtcaaagaggccgaagaaaccactccaactaaggttaaagag
gaggaacctgtcaagatcgagcagaaagattggttttcaagccacgattccctgaaaatg
accgaaaagtttgagccacttgacttccagagcaaaaagagccctgctgaggattcagat
tctgagtcaccaacagcagactctctgtctccagtcctggaagctatggccaagaaccct
gccatcttccaggtggaaaccgagaagaccgacctgaagatggaggatgacgagccagag
gtggctgaggaagtctccgaacatgaagtctcatctgaggagtttgagttcattgagaga
cctcccaggggtgttattgatgagtttcttgaggctcttgatacctccaagtttgcctcc
tccaaggtcccagagctcgccatggatgatgacctaagctttgagccgaaagacctggct
ccagtttctcctgcaaaagtctcaccctcaccccctgaagtcgaagaagaagctgcaagt
cagagctcctaccgcctcctcacccaggcctccccccagaagagcaaggcagagctagag
aagctcgacattcagcagcccccaccccaagtatccccactcgtccattcccctgtccgc
aaaccagaggagacggtcgctaagaagagtgtggagggcggcaaagtgtttaagatgcca
aacgtgaacataaaagcagtggtggatctcctctactggcgtgatgtgaagaccacaggc
gtggtgttcggcgccatcctgctgctgctgctctccctgacggtgtgcagcatcgtcagc
gtctgctcctacatcggcctggctctgctgtccgtcaccatctgcttcaggatatacaaa
ggcatcctgcaggccatccagaagtcagatgagggacatccattcaagcagtacctggac
cacgaggtggcgctctctgaggacatggtccacaagtacagcgacatcgttctggccaga
ctcaacaagaccatcggtgagctgaggcgcctgttcctggtcgaggacctggtcgactcc
atcaagtttgctgtgttgatgtggatcctgacctacgttggtgccttgttcaacgggctc
accatcgttattctgaccgtggttggagtgttcagctgcccgatcgtctatgagaaacac
caggctcagatcgaccattacgtggctctggtcaacaaccaggtcaaagacgttgttgga
aagatccaggcgaaggtgccagggatgaaacgcaagacggagtga
DBGET
integrated database retrieval system
