Scomber japonicus (chub mackerel): 128373274
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Entry
128373274 CDS
T09718
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128373274
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128373274
Transporters [BR:
sjo02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
128373274
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GFIT
Motif
Pfam:
SSF
Prominin
Motif
Other DBs
NCBI-GeneID:
128373274
NCBI-ProteinID:
XP_053189538
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Position
14:3949706..3954528
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AA seq
547 aa
AA seq
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MAVNIPGLIAMVFFYLLVLGTGIWASFKSKKEQKKSAATRMDMALLGNRSLNMLVGICTM
TATCIGGGFIVGSCELVYTPSFGVIWGIILFSAYGVSFILGGLLFAKPMRDQKYVTMLDP
FHIKYGKTVTALQALSSLTVDVTWFPATLMGLGVTMSVILDLPYTVCIWISAAVVIIYTL
LGGLYSVAYTDVIQLLLIFISLWICVPFVLMSPYSLDITQTALNNTLHAPWLGKLEPHMI
WRAIDYFLVMGCGVLGYQAYHQRTLSASSSAAAQTSSFAAAFFMFVFGTPSLLIGAVAAS
TDWNLTSYGSPSPYERGEAAQILPIALQHLTPSYVSIFGIGAIAAAVMSSADSALLSAAT
IFTSNIYKNILRPQASQREIQWVLRVAVVVVGLVGMSLTSLKKSIIVVWFISTEVAYVLI
FPQLICVLYFNICNSYGAIMGWVIGLVIRLLSGDPRLGLPVILHFPGCTLEDGVYVQYSP
VKTISMLSSMAAILFFSYLASLLFNKGLLPEKLDVFKVKVQRSPQPPTASLAELDEDVSE
PMISTTC
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaacatcccaggattgattgcaatggtatttttctacctgctggtccttgga
actggcatctgggcttcattcaagtccaaaaaggaacagaaaaagagtgcagctaccaga
atggacatggctctgctggggaaccgaagccttaacatgctggtggggatctgtactatg
acagctacatgtatcggtggaggtttcattgttggctcatgtgagctggtgtacacgccc
tcttttggagtaatctggggcatcattctgttttctgcatatggagtgtctttcattttg
ggtggtttgctatttgcaaagccaatgagagaccagaaatatgtgaccatgttggaccct
tttcatatcaagtatggaaaaacagttacagcccttcaggccctgtcttcacttacagtt
gatgttacctggtttcctgcaacactgatgggtttaggtgtaactatgagtgtgattttg
gatttgccctatactgtgtgtatctggatctctgctgctgtggttatcatctacacacta
ctgggaggtctctactctgtggcctacacagatgttatacagctcctcctcatattcatc
agcttgtggatctgtgttccctttgtcctgatgagcccctactccttagacattactcag
acggccctgaacaacaccttacacgctccctggttgggtaaactagaaccacacatgatt
tggagggcgatcgattatttcttagttatgggatgcggcgtcctgggatatcaagcctac
caccagagaaccttgtctgcttcttcatcagcggcagctcagacctcatcttttgcagct
gctttcttcatgtttgtatttgggactccgtctttactgattggggcagtggcagcatcc
acagattggaacctgacttcctatggttctccatctccatatgaacggggggaagcagct
caaatcctgcccatcgccctgcaacacctcactccatcctatgtctccatctttggtatt
ggagccattgctgctgccgttatgtcctcagctgactctgctttactgtctgcagccact
attttcacctcaaacatctacaaaaacatcctgcgacctcaggcatcccagagggaaatc
cagtgggtgttgcgtgtcgctgtagtggtagtaggcttggttggtatgtcactcaccagc
ttgaaaaaaagcattatagtggtctggtttattagcacagaggtggcctacgtcttaatc
ttccctcagctcatctgtgtcctgtacttcaacatctgcaacagttatggagctattatg
ggctgggtgattggcttggtcattagactgctgagtggagatccaagactgggactacca
gtaatcctccacttccctggatgcactcttgaggacggcgtttatgtccagtactctcca
gttaagaccatctccatgttgtcttccatggctgccatcttgttcttctcctacctggct
tctctgctcttcaacaaaggtctgctaccagagaagttggacgtgttcaaagtgaaagtc
cagcgctcaccacagccaccaacggcatcactggcagagcttgatgaagatgtctcagag
ccaatgattagcaccacgtgttag
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