Scomber japonicus (chub mackerel): 128373332
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Entry
128373332 CDS
T09718
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128373332
04121 Ubiquitin system [BR:
sjo04121
]
128373332
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128373332
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128373332
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
DUF659
hAT-like_RNase-H
OrsD
p450
Microp_apicomplexa
Motif
Other DBs
NCBI-GeneID:
128373332
NCBI-ProteinID:
XP_053189597
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Position
14:complement(11245139..11250353)
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AA seq
598 aa
AA seq
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MADIAEEKEEVGKTDVAKEKDDIHTPHGSKSFVWKYFGFRKDGRKLIKDMAICRKCRWEA
RYCGNTSNLSAHLKRRHRDILGEEKAQPSTTLTTLFPQKFSNSSKRAKNISKAIAFFICR
DIRPYCVVENEGFRYLLDTLEPRYCIPSRQHFSESVIPKLYAKVRDGVIQELQKAQRVAV
TCDGWTSCTTESFITVTCHFIDHEWEMHNYVLQTRVLAETHSGVNLGHVLRAACEEWGLS
DKAPALITDNASNMKRAGEEAGMSPHIMCFAHTLNLSTQDGLKIAATDRLLGRVRRILKS
DVKTRWNSSFEMLERFLEQQHAVTATLLDKKLRKGASDIHTLTESDLTAAEQMVSLLAPL
KAATTLMCEEKQPTVSIIAPLRTKLLTHFECAPDDTPLIRDMKRAMAEDLQERYEDEEPF
LHRAAALDPRFKKLPFLTDEKRNQTFECIAEEAVQLKEQRLQNEAEAQAQKTPPRAQTCD
DEWETETEEAPPASKKTKVLDDLFGDSFSTEDLSVRKKTSKELVNDEIRKYRDIASLSLG
GKVLEWWKAHQAEFPLLADLAKTYLCIPGLTEHEILSQAFMFIFGGYETTSATLFPTL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggctgacatagcagaggaaaaagaagaggtaggcaaaacagacgtggcgaaggaaaaa
gatgacatacacacccctcacggttccaagtcgtttgtgtggaagtatttcgggttccgt
aaagatggaagaaaactgattaaggatatggctatatgcagaaaatgtcgttgggaagcg
cgctactgtggcaacacatccaatctgtctgctcacctgaaaagacgccatagagatatc
ctcggcgaagaaaaagcacaaccctctacaacattgacgacactttttcctcagaagttt
tcgaacagctctaagagggcgaagaatatatccaaggcaatcgcgttcttcatatgtaga
gacatacgcccctattgcgtggtggagaacgaaggcttccgttacctgctcgacactctg
gagccgaggtattgcattccctcgcgacagcacttcagcgaatcagtgattccaaagttg
tatgccaaagttcgtgatggtgtcattcaagagttgcagaaggcacagcgcgtagctgta
acatgtgacggatggacctcctgcactacagagtcattcatcacagtaacatgccacttc
attgaccacgaatgggagatgcacaattacgtgttacagacgcgtgtgctggcggagaca
cattcaggagttaacctcggacacgtcctgcgagctgcgtgtgaagagtggggtctgagt
gacaaagcgccagccctcatcacagataatgcatccaatatgaagagggctggggaagag
gccgggatgtcaccccacatcatgtgcttcgcgcacacactcaatctgtccactcaagat
ggcctcaaaattgcagccacggacaggctgttgggtcgagttaggagaattcttaaatcc
gacgtgaagacaaggtggaacagttcattcgagatgttagagcgattcctggaacaacag
catgcagtgacggcaacactcctggacaagaagctgaggaaaggcgcaagcgacattcac
actctcacggaaagtgacctaaccgcagcagagcaaatggttagcttgttggccccactg
aaagctgccaccacgctcatgtgcgaagaaaagcaacccacagtatcaatcatcgcaccc
ctcagaacgaaattgctgacgcatttcgaatgtgcaccggacgacactcccttgatcaga
gacatgaaacgagccatggccgaggatctccaagaacggtacgaagacgaggaaccattc
ttacaccgtgcagctgcgttggacccgaggtttaaaaagctcccgttcctgactgatgaa
aaaagaaaccaaacctttgaatgcattgcggaggaagcagtacaactgaaggaacagagg
ttacagaatgaagcagaggcccaggcccagaaaacacctcctcgtgcccagacgtgtgat
gatgaatgggaaactgagactgaagaagcacccccagcttccaagaaaacaaaagtattg
gatgacttgtttggtgactccttcagcactgaggacctaagtgtcaggaagaaaacatcc
aaggagcttgtcaatgatgaaattaggaagtacagagacattgcatctctgagcctgggt
ggtaaggtgctagaatggtggaaagctcaccaggctgagtttcctctcttggccgacctg
gccaagacctacttgtgcatacctggtttgactgaacacgagatcctttcccaggccttc
atgttcatctttggcggctacgagaccaccagcgccactctgtttcctactttataa
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