Scomber japonicus (chub mackerel): 128373372
Help
Entry
128373372 CDS
T09718
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128373372
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128373372
Transporters [BR:
sjo02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
128373372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
128373372
NCBI-ProteinID:
XP_053189650
LinkDB
All DBs
Position
14:complement(4730244..4752807)
Genome browser
AA seq
558 aa
AA seq
DB search
MALNIPGVTVMMFFYLLVLGIGIWASFKSKKEAKMVQGDKTEMALLGNRGINLVVGIFTM
TATWVGGGFIVGTAEAVYNPSMGLIWAVMPIAATLCFIIGGLFFAEPMRNNKYVTMMDPF
QIKYGKVPTAALSMASLVSEIMWVTGTLIGLGVTMSVILDLSYTVSIWISAAVAITYTLM
GGLYSVAYTDIIQLILIFISLWLCVPFALMCPAVVDITETAYNYTFQSPWVGSLEADRVW
RWIDNFLLLGLGNLGLQNFHQRTLSAASSSTAKITCFTAAFIVPTLGIPPILLGAVAAST
DWNLTSYGSPSPFERGDTGLILPIVLQHLTPTYISIIGIGAVAAAVMSSTDSALLSAASI
FTSNIYKNILRTQASEQEIQWVIRVSVVVVGLAGTSLTFLDNSVLMIWLLRSDLTYTLML
PQLICVLFFKISNGYGAILGCIVGVVLRVLCGEPLLGIPTILKFPGCTLVNGVYVQSSPI
RTICMLSAVAAILLFSYLADLLFNKGLIPEKLDVFKVKALNSSQTQGGGDKSDTKGEESL
KERNENDEACEPMLESRC
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaatatccccggagtgaccgtgatgatgttcttctacctgctggtcctcggg
atcggcatctgggcctctttcaaatcgaaaaaggaagccaagatggtccagggggataag
acggagatggcgctgctgggaaaccggggcatcaaccttgtggtcggcatcttcaccatg
acagctacatgggttggaggaggattcattgtgggaacagcggaggcagtctacaacccc
tctatgggactgatctgggccgtcatgccaattgcagcaaccttgtgtttcatcattggt
ggcctgttctttgccgagccgatgagaaacaataagtatgtcaccatgatggatcctttc
cagatcaaatatggaaaagtgccgacggccgctctgtccatggcttcactcgtatcagag
attatgtgggtgacaggaacactcataggattaggagttaccatgagtgtgatcctggat
ctgtcctacactgtgagcatctggatctctgctgctgtggccatcacctacacactgatg
ggaggtctctactctgtggcctacacagacattatacagctcatcctcatattcatcagc
ttgtggctgtgtgtccccttcgccctgatgtgccccgctgtggtggacatcactgagacg
gcttacaactacaccttccagtctccgtgggttgggtctcttgaggccgacagagtctgg
aggtggatcgataactttttactgctgggtttggggaacttgggtcttcagaatttccac
cagaggactctgtcagctgcctcctcaagtactgccaagatcacctgcttcaccgctgcg
tttatcgtccccacattaggcatccctcccatactcctcggtgcagtggccgcatcaaca
gactggaacttgacctcttatggttccccgtctccgtttgaacgcggggacacgggtctc
atcctgccgatcgtcctgcagcatctcaccccgacctacatctccattatcggcatcggg
gcagtggccgccgccgtgatgtcatcgactgactctgccttgctttctgccgcctccatc
ttcacctccaacatctacaagaacatcctgaggacccaggcgtcggagcaggagatccag
tgggtgatccgggtgtcggtggtggtggtgggtctcgccggtacgtctctcaccttcctg
gacaacagcgtcctgatgatctggttgcttcgatccgacctcacctacactctcatgctg
cctcagctcatctgcgtcctcttcttcaaaatctccaacggttacggggccatcctgggt
tgcatagtgggcgtggtgttgagggtactgtgcggggagccgttgctggggataccgacc
atcctcaaattcccaggatgcactctggttaacggtgtttacgtccagagttccccgatc
agaaccatctgcatgctctctgccgtggcggccatcttgttgttctcctacttggcggat
ctgctcttcaacaaaggtctaatacctgagaaattggatgtttttaaagtgaaagctctg
aactcatcgcaaacgcaaggcggcggcgacaaatccgacactaaaggagaggagagcttg
aaagaacgaaatgaaaacgatgaagcctgtgagccaatgttagaatcaagatgttaa
DBGET
integrated database retrieval system
