Scomber japonicus (chub mackerel): 128373657
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Entry
128373657 CDS
T09718
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128373657
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
128373657
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
128373657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
IBR_1
IBR_2
Ank_2
Ank
Ank_5
UBA_ARI1
Ank_4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
128373657
NCBI-ProteinID:
XP_053189776
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All DBs
Position
15:16660651..16679737
Genome browser
AA seq
1329 aa
AA seq
DB search
MGNTATKFRKALVSGDEALAWQLYEGNPQFRDGLDPNASYGEQYQHNTPLHYVCRHAMTR
LLRSFLFSKEGNPNKRNVHNETCLHVLCQGPQILLLPEGALSPRLARPQRDEQRRADCLQ
MILSWTGARLEGGQYEKANVNATDNHHSTCLHYAAAAGMKSCVELLIQSEADLFVEDEGK
LTPCDHAERHHHTELALSLESQMVFSSSSAQQSNTDAHGETNLLQYKEPYEGLKLQDLRR
LKDMLIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSDAEGCCQRSGVIMPTPPPSG
YNAWDTLPSPRTPRTPRSPLTLTLTSPTDSCLTPGEEGLATCGICLCSISVFEDPVDMSC
GHEFCRACWEGFLNVKIQEGDAHNIFCPAYECYQLVPVHVIESVVSREMDQRYLQFDIKA
FVENNPAIRWCPAARCERAVRLTRPGPGDSDPHSFPLLPSPAVDCGKGHLFCWECLGEAH
EPCDCQMWRNWLQKVTEMKPEELAGVGEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCN
HMQCAKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQLEEQSKEMTVEAEKKHKSFQ
ELDRFMHYYTRFKNHEHSYKLEQKLLKTAKEKMEQLSRAFICREGTPPNTRFIEDGVCEL
LKTRRVLKCSYPYGFFLQQGSTQKEIFELMQTDLEMVVEDLAQKVNRPYLRTPCHKIISA
ARLVQQKRQEFLASVARGVAPNDSPELPRRNYPGGSWDWEYLGFASPEMGSRHSVLGPGD
QRERQSQDYADIQYRRRHRPRRRGDMLSLHNLRSSSNTPETNRRSDSTEGPERSEGRRRA
LGSLDEDDPNILLAIQLSLQESRRERGLEGGMERSMEGRVELDRGLDRGQERRPGPAGDL
GDVALHSLNKDGPPGARGSSFPTSLLDPPRPPNRTDSTCQPPMPNSLPLPPPPPSLSAEL
LELGDSLMKLGNITTPYDLDTHTQEQLCSHHTYNHSALSASYTMEPAYSDCSHRPDPGAL
NTPYVLDHITITDPRYDSKEQNYCHTSTYLAEAEQTASCALERTQNPAHPSLYNQEHAAT
YDSTPKPDSSYNPCPEHSSSYTQERPALYALDQPPKSDPQPLAQLCLPSPDLEPELLLSP
VIPPGGPFTPSDPQSLEPLDPTTSAQLLDNIMAWFNHNINPQNNPQSLALIPSPPTTETD
SSPDTHTETESESQTSRDVTPAPIWQPLEGEPEVDRGSASPCQGAAGVEGQKRPCTLELE
NREAGEEDVDAGCVADLSLDEAHTHPCSHAQHGNSPTHTAPATETDLDLVLQLEGDQSPE
EWEEQVHLV
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacacagccaccaagttccgtaaggctctggtgagcggcgacgaggccctggcc
tggcagctgtacgagggcaaccctcagttcagggacggcctggacccgaatgcgtcgtac
ggagagcagtaccagcacaacacaccactgcactacgtctgccgccatgccatgacccgt
ctactcaggtcctttttgttcagtaaagaggggaaccctaacaagcgtaatgtgcacaac
gagacgtgcctccatgtgctgtgccaaggcccacagatcctactgctgccagagggggcg
ctgtcaccacgactggcccgaccccagagggacgagcagcgccgtgcagactgtctgcag
atgatcctaagctggacaggggccaggctggaaggaggccagtatgagaaggccaatgtc
aacgccactgacaaccaccacagcacctgtctgcactacgctgccgctgcaggcatgaaa
agctgcgtggagctgctaatccagagcgaggcggacctttttgtggaggatgagggcaag
ctgacgccatgtgaccatgccgagcggcatcaccacactgagctggccctcagcctggag
tcacagatggttttctcctcctcttcagctcagcagtcaaacacagacgcacatggtgaa
accaacctgcttcagtacaaggagccttatgagggactgaagcttcaggacctgcgtcga
ctgaaagacatgctgatcgtggagacggcagacatgctgcaagctcccctcttcactgcc
gaggccctgctccgagcacatgactgggatagagaaaaacttctggaggcttggatgtca
gacgctgaaggctgctgtcagcgctcaggcgtgatcatgcccacccctccacccagcggc
tataacgcttgggacaccctgccctcaccccgcactcccaggacccctcgctcacctctc
acactcaccctcacctctcccaccgacagctgtctcacacctggcgaggagggcctggct
acgtgtggaatctgtctgtgctccatctcagtgtttgaggacccagtggacatgtcctgt
ggccacgagttctgcagagcctgctgggaagggttcctcaatgttaagattcaggagggt
gatgctcacaatatcttctgtcctgcttatgagtgctaccagctggtgccggtgcacgtg
atagagagcgtggtttccagggagatggaccagcgataccttcagtttgacatcaaggct
tttgttgaaaacaacccagccatccgctggtgtcctgcagcacgctgtgagcgagcggtg
cggcttacccgcccaggccccggggacagtgacccacacagcttccccctgctgccctcc
ccagctgtcgattgtggcaagggtcacctcttctgctgggagtgccttggcgaggcccat
gagccatgtgactgtcagatgtggaggaactggctccaaaaagtcacagagatgaagcct
gaggagctagcaggtgtgggcgaggcctacgaggatgctgctaactgcctgtggctgttg
accaactccaagccgtgtgccaactgcaagtcacccattcagaagaatgagggctgcaac
cacatgcagtgtgccaagtgcaagtatgatttctgttggatctgtctggaggagtggaag
aagcacagctcatcaacaggaggctactaccgctgcactcgctatgaggtcatccaacag
ctagaggagcagtccaaggagatgactgtagaggcagaaaagaagcacaaaagttttcag
gagctggatcgttttatgcactattacactcgcttcaagaaccatgaacacagttataag
ttggagcagaaactgctaaaaacagctaaagagaagatggagcagctcagcagagccttc
atttgccgtgaaggcactcctccaaacacacggttcatcgaggatggcgtgtgcgagctg
ctgaagacgcggcgcgtgctgaagtgctcttacccatacggcttcttcctgcagcaaggc
agcacccagaaagagatatttgagctcatgcagacggacctggagatggtagtggaagat
ctggcccagaaggtcaaccggccgtacctgaggactccgtgccacaagataatcagtgcc
gctcgcctggtccagcagaagaggcaggagttcctggcatcagtggctcgtggtgtggct
ccaaacgactctcccgagcttccccgcaggaattaccctggaggatcatgggactgggag
tatctgggctttgcctcccctgagatggggagtcgccactccgtactgggaccaggagat
caaagggagagacagtcacaggattatgctgacatccagtaccgtcgtagacacaggcca
cggcgcagaggagatatgctgagtctgcacaacctgagaagcagcagcaacacaccagag
accaacaggaggagtgacagcacagagggtccagagaggagcgagggccgcaggagagcg
ctgggctccctggacgaagacgatccgaacatcctgctggccatccagctgtcgcttcag
gagtcccgcagagagcgaggcctggaggggggtatggagagaagcatggagggaagggtg
gagctggatcgcggactggacaggggacaggagaggagaccgggtcctgcaggagacctg
ggtgacgttgcgttgcactctctcaacaaagacggtcccccaggagccagaggctcatcc
tttccgacttctctcctagatcctcctcgtcccccaaacaggacagactccacctgccaa
cctcccatgcctaattctctccccctccctcccccacctccctctctcagtgcggagctg
ctggagctgggagacagccttatgaaactagggaacataaccactccttatgacctagac
acacacacacaggagcagctctgctcacaccacacatacaaccacagtgctctctctgct
tcctacaccatggaacctgcttacagcgactgcagccatagaccagacccaggtgcactg
aacaccccgtatgtgctcgaccatatcaccatcacagaccctcgctacgacagtaaagag
cagaattactgccacacaagtacttatttggctgaggctgaacagactgcctcttgcgca
cttgaacgtacccaaaaccccgcccatcctagtttatataaccaggaacacgcagccacg
tacgacagcaccccaaaaccagacagctcttataacccttgcccagaacacagtagctct
tacactcaagagcgtcctgccctctatgctcttgaccagccccctaagtcagacccccag
cccctcgcccagttgtgcctcccttctccagacctcgagccggagctgctgctttcacca
gtcatccccccaggggggcctttcacccccagcgaccctcagagtctggaacccctggac
cccacaaccagtgcccagctgctggacaacattatggcctggtttaaccacaacataaac
ccccagaacaacccccagagcctggctctcattccctccccacccaccacagaaaccgac
tcctcgcccgacacacacaccgagactgagtcagagagccagacctccagggacgtaacc
cctgccccgatctggcagcccctggagggcgagccagaggtggacagagggtctgcgagc
ccctgtcagggtgctgcgggcgtggagggccagaagaggccttgtactttggagctggaa
aacagagaggctggcgaggaggacgtggacgccgggtgtgtggctgatctgtcgctggac
gaagcgcacacacacccatgctcacacgcccaacatggaaacagtcccacacacactgcc
ccagccacagagacagacttagacctcgtgcttcagttagagggggaccaatcacctgag
gaatgggaggagcaagttcacttagtgtga
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