Scomber japonicus (chub mackerel): 128373664
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Entry
128373664 CDS
T09718
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04120
Ubiquitin mediated proteolysis
sjo04137
Mitophagy - animal
sjo04144
Endocytosis
sjo04340
Hedgehog signaling pathway
sjo04350
TGF-beta signaling pathway
sjo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128373664
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128373664
04350 TGF-beta signaling pathway
128373664
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128373664
04137 Mitophagy - animal
128373664
09144 Cellular community - eukaryotes
04520 Adherens junction
128373664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128373664
04121 Ubiquitin system [BR:
sjo04121
]
128373664
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128373664
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128373664
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128373664
Autophagy
Mitophagy
Other mitophagy associated proteins
128373664
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
HECT type E3
128373664
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128373664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
128373664
NCBI-ProteinID:
XP_053189787
LinkDB
All DBs
Position
2:complement(26144551..26206266)
Genome browser
AA seq
776 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKADSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
GPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAEASGPPGEQRLQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNSPSPNGSRVAMDSQNTNL
SHPTQLKDQVVPGVPQQAMSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGH
CRIEVCREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNP
YYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQL
LGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIP
VSEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKI
DISDWKSNTRLKHCTPDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGA
AGPRLFTIHQIDANTNNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGFAVE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagttaggaggaatggcccagtgaagctgcggttgacagtcctgtgt
gcgaagaacctggcaaagaaagacttcttccggttaccagatccctttgccaaagtggtg
gtggatggctcaggacaatgccactctacagacactgtgagaaatacgctggacccaaag
tggaatcaacattatgatctatacattggaaaggcagactccataaccatcagtgtgtgg
aaccacaagaagatccacaaaaagcagggagcaggttttctgggctgtgtccgcctcctg
tccaatgccatcaacagactcaaagacacaggctatcagagactggacctaaataaactg
ggccccaatgacaatgatactgtgagaggacaaatagttgtaagtcttcagtccagggat
cgcatcggtacaggaggaccggtggtggattgcagtcgcctgtttgacaatgacttaccc
gatggatgggaagagaggaggacagcctcaggaaggatacagtacctgaaccacatcact
cgtaccacacaatgggagagacccaccaggcccgcttcagagtactccagcccatcaggg
cgtcctttgagctgtgtggtggacgagaacacgccagtgatgacgcccgttaacggggca
gaggccagcggcccgccaggtgaacagcgactccaggagagaagggttcgatcgcagcgg
caccgtaactacatgagtcgaacacacctgcatacgccacctgacctgcctgagggttat
gagcaaagaacaactcagcagggccaggtctacttcctccacacacagactggagtcagc
acctggcatgacccccgggttcccagggatttaagcaatgtgaactgtgaggagctcggc
cctctgccaccaggttgggaaatcagaaacactgcaaccggccgtgtctactttgtcgac
cacaacaatcgaacaacacagttcacagacccgcgactgtctgctaacctgcatctagta
ctcaacagcccaagtccaaatggttcccgtgtggccatggacagccaaaacactaacctc
agtcatccgactcagttgaaggaccaggttgttcctggtgtccctcagcaagctatgtcc
ccagcccagttgcctgaagaggcagagtgcctgacggtgcccaagtacaagcgagacctg
gtgcagaagctgaagatcctgcggcaggaactatctcagcaacaaccccaggctggccac
tgccgcattgaggtctgccgtgaggagatatttgaggagtcataccgacaagtgatgaag
atgcgtccaaaagatctctggaaaagactgatgatcaaattcagaggagaagaggggctc
gattacggtggggtagcaagggagtggttgtacctgctgtcccatgagatgctgaatccg
tactatggcctgttccagtactccagagatgacatctacactttacagattaaccccgat
tctgctgtcaaccctgagcacctgtcgtacttccactttgtgggtcgtatcatgggcatg
gcagtgttccacggccactacattgacggaggcttcaccctgcccttctacaaacagctg
ctgggaaaaccgatcacgctggacgacatggagtctgtcgacccggacctccacaacagc
cttgtctggatcctggacaatgacatcactggcgtcctagaccataccttctgtgtcgag
cacaatgcctacggagaaatcatccaacacgagctgaaacccaacggcaagagtatcccc
gtctctgaggacaccaagaaggagtatgtcaggttgtatgtgaactggcgtttcctgcat
ggcattgaggctcagtttctggccctacagaaaggctttaatgaggttatccctcaacac
ttgctcaaagcctttgatgagaaggaacttgagctgatcgtctgcggcctgggaaagatc
gacatctctgactggaagtccaacactcgtctgaagcactgcacccccgacagcaacatc
gtaaagtggttttggaaagcagtcgagtcatttgatgaggagaggagggcccggctgctg
cagtttgttaccggctcatccagagtccctctgcagggcttcaaggctttacagggtgct
gcagggcccagactcttcaccattcaccagatcgatgccaacaccaacaatctgcccaaa
gcccatacctgcttcaatcggattgacattccaccctacgagagctacgacaagctatac
gacaagctgctgactgcgatcgaggagacctgcggcttcgcagtggaatga
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