Scomber japonicus (chub mackerel): 128373680
Help
Entry
128373680 CDS
T09718
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128373680 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128373680 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128373680 (vps28)
Membrane trafficking [BR:
sjo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
128373680 (vps28)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128373680 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
128373680 (vps28)
Exosomal proteins of colorectal cancer cells
128373680 (vps28)
Exosomal proteins of bladder cancer cells
128373680 (vps28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
128373680
NCBI-ProteinID:
XP_053189805
LinkDB
All DBs
Position
15:16593572..16598801
Genome browser
AA seq
223 aa
AA seq
DB search
MFHGIPVTGGVGGAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTASCSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VSLWLTTLSSMSASDELDDNQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttccatgggataccagtcacaggaggtgtaggaggagcgccggccaataaacctgag
ttatatgaggaagtgaaattgtacaaaaatgcaagagaacgagagaagtatgataacatg
gccgagttgtttgctgtcgtcaagacccttcaggccctggagaaagcttacatcaaagac
tgcgtcacacctaatgagtacactgcttcctgttccagactgttggttcagtataaggct
gctttcaaacaggtgcagggctccgatgtcggctccatcgatgacttctgcaggaagtac
agacttgactgcccactagccatggaaaggattaaggaggatcgaccaatcaccatcaag
gatgacaagggcaacttgaaccgctgcattgcagatatagtctctctgtttatcactgtg
atggataagctgagactggagatcagagccatggatgagattcaaccggacctgagggag
ctgatggaaaccatgaacagaatgagcaacatgcctccagactcagaggccaaggacaaa
gtcagcctctggttgaccaccctcagcagcatgtcggcctcagatgagctggatgataat
caggtgcgtcagatgctgttcgacctggagtcagcctacaatgccttcaaccgcttcctc
cactcttcctaa
DBGET
integrated database retrieval system
