Scomber japonicus (chub mackerel): 128373693
Help
Entry
128373693 CDS
T09718
Symbol
elp2
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjo03016
]
128373693 (elp2)
Transfer RNA biogenesis [BR:
sjo03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
128373693 (elp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Rax2
Motif
Other DBs
NCBI-GeneID:
128373693
NCBI-ProteinID:
XP_053189820
LinkDB
All DBs
Position
15:complement(18284278..18309877)
Genome browser
AA seq
846 aa
AA seq
DB search
MAPPVIETCHVACCANRTPNVVSWSRGWTIAFGTCNSVALYDPQGKRVVSLLNGHTDRVN
AVQWVHREDCAPETHLVSGGSDNRLIVWEAQNGKFIQSVECKGHTGPVCAVDAIYVDYPK
ILVASSASDSTVRLWLCSDAKDAECLHTLSFGSGFMMDVSLALLPGSRVPILSCGGDDSR
VHLYVQSDKQLQKVMTLQGHEDWVRGVAWVSIGGELLLASCSQDCLIRVWRLCAKSGTDA
RTEDDHTIIKMKEDVFEVKERDASSVFAVSLETVLAGHENWVYGVHWQPPFYKGGKLQQP
LSLLSASMDKTMILWAPEEGSGVWVEQVRVGEVGGNTLGFYGCQMSPDGSMILAHAFHGA
LHLWCQDQDKEGEWRPGVVISGHFNAVQDLSWDPEGDFILSVGSDQTTRLFTPWRKQDGK
KATWHEISRPQIHGYDMQCLAMVGRFQFVSGADEKVLRVFQAPRNFVENFANISGMSREK
LLTSSDCANLPEGASTPALGLSNKAVFQGDLVSKTKEDEKQFSSVSDQYQESYFHPLSLT
EPPPEDHLLQNTLWPEVQKLYGHGFEMFCLASDSARTVVASACKASKAEHASVLLWSTST
WRQLQTLPCHTLTVTQMAFSPDARLLLVVSRDRTWSLWRRNLPTLDSPEPQFSLHAHTGK
DTAVHSRIIWSCDWSSDSKYFVTSSRDKKVIVWGLCRLEDSGDPAPPHEIKPCSSILDVG
DSATAVAFCPVLCSDNSYLLAVGLEYGRILLYRWSPGQDPAGGHDWGSCAETDTSQSHSL
AVKRLVWRPRAGRAGRENNSRVGLKGEEDEQTDRENELEEESSWVQLASASADHSVKIFN
INKLAL
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcctgtaatagagacatgccatgttgcttgctgtgcgaacaggacaccaaat
gttgtttcttggagtcgtggatggacaattgcgtttgggacatgcaactctgtggctctg
tacgacccacaggggaagagagttgtctcgctgttgaatggacacacagacagagtaaat
gcagtgcagtgggttcacagagaggactgtgctccagagactcatcttgtgtcaggaggc
tcagacaatcgcctcattgtgtgggaggctcaaaatgggaagttcatccagtcagtggag
tgtaagggtcatactggtccagtttgtgctgtggatgccatctatgtggactatccgaag
attctggtggcctcctcagcatctgactccacagtgagactgtggctctgcagtgatgcc
aaagatgctgagtgcctccataccctatcatttggcagcggtttcatgatggatgtctct
ctggctctgttaccaggcagcagagttcccatactctcctgcgggggtgatgactcacgg
gtgcatctgtatgtgcagtctgacaaacagctgcagaaagtcatgacactgcaaggacac
gaggactgggttcgtggagtggcgtgggtgtctataggtggggagctgttattagccagc
tgttcacaggactgtctcatcagagtatggaggctgtgtgccaagtctgggacagacgcc
cgcacagaggacgatcacaccatcatcaaaatgaaagaggacgtttttgaagtgaaggag
agagatgcatcctcagtgtttgctgtgtctcttgagacggtcctggcaggccatgaaaac
tgggtctatggagtccactggcagcctcctttctacaaaggtggcaagctgcaacagcct
ctcagtctgctctctgcctccatggacaaaaccatgatcctctgggctcctgaagaggga
tctggagtttgggtggagcaggtgcgtgtaggggaggtcggtggcaacactctgggtttc
tatggctgccagatgagtccggatggctccatgatccttgctcatgcttttcatggagcg
ctacatctctggtgccaggaccaagacaaagagggagagtggaggcctggggttgtgata
tcaggtcacttcaatgcagtccaggacctgagctgggatcctgagggggattttatcctc
agtgtgggctcagaccagactaccagactttttactccatggaggaaacaagacggtaaa
aaggcaacctggcatgaaatctcgcggccacagatccatggatatgacatgcagtgtcta
gcaatggtcgggaggtttcagtttgtgtctggcgccgatgagaaggtcctgcgggtgttt
caagcacctcgtaattttgtggagaactttgccaacatctctgggatgtcgagagaaaag
ctgttgacatccagtgattgtgccaaccttccagaaggagccagcacacctgccttgggt
ttgtccaacaaggctgtatttcaaggtgaccttgtctcaaaaaccaaagaggatgagaag
cagttcagcagcgtatctgaccaataccaggagtcttactttcacccgctcagcttgact
gagcccccaccagaggatcatcttctccagaacacactctggcctgaggtccagaaactg
tatggtcacggctttgagatgttctgcctcgcctctgacagtgccaggacagtggtggca
tcggcgtgcaaggcatctaaagccgaacacgcatcagtgctgctgtggagtacatctacg
tggcgccagcttcagacgctgccgtgccacaccctcaccgtcacccagatggccttctcc
ccagatgcacgactgctattggttgtttcccgtgatcgcacctggtctttatggagacgc
aacctgcccacccttgatagcccagagccccagttctcgctgcatgcacacacagggaag
gatacagctgtacacagccgaatcatttggtcatgtgactggagctctgacagcaaatac
tttgttacatccagtcgggacaaaaaggtgattgtatggggactgtgtagattggaggac
tctggagaccctgcgcctcctcatgagattaaaccatgttcttccatcttggatgtgggc
gattctgccactgctgtggctttctgccctgtactctgctctgataacagctacctgctg
gcagtgggtctggagtatgggaggattctgctgtacaggtggagccctggccaggatccc
gctggaggacatgactggggcagctgtgcagagactgacacctcacaaagccactccttg
gcagtcaagaggctcgtctggaggcccagagctggccgagcaggtcgagagaacaacagt
cgggttggactgaaaggggaggaggatgaacagactgacagagaaaatgagctggaggag
gaaagctcctgggtccagcttgccagtgccagcgccgaccactctgtcaaaatcttcaac
atcaacaaactggctctttag
DBGET
integrated database retrieval system