Scomber japonicus (chub mackerel): 128373754
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Entry
128373754 CDS
T09718
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128373754 (rnf115b)
04121 Ubiquitin system [BR:
sjo04121
]
128373754 (rnf115b)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128373754 (rnf115b)
Membrane trafficking [BR:
sjo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
128373754 (rnf115b)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128373754 (rnf115b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
Zn_ribbon_19
zf-rbx1
zf-ANAPC11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
128373754
NCBI-ProteinID:
XP_053189909
LinkDB
All DBs
Position
15:12850066..12855418
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AA seq
295 aa
AA seq
DB search
MAEAADRPQHRFFCHCCKCETNPKLPDLICPRCESGFIEEVTEDSSLLENSTSVASDDSN
SLFSELWQLLFMERSALLSHPPSSESDPDDSEQVSAGQSRLSPVLAGAAEVTEPEAPSQP
EQERSTRPEQRPAVEGIVQQFLAGLFANNGNPGAAPAALSNMLQLHSNPGDYAWGQGGLD
AVITELLGQLENTGPPPAEKEMISSLPTVCISQEQTACRLECPVCREEYLSGESVRKLPC
LHYFHSECIVPWLELHDTCPVCRKSLEGIDNSLPPTSDPLEARSIRTEQQERQAI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcggatagaccacaacaccgttttttctgtcactgctgtaaatgtgaa
acaaaccccaaactcccggatttaatctgccccaggtgtgaatctggcttcattgaagag
gtgacagaagactccagcctcctggagaacagcacatcagtggcgagtgatgattcaaac
tcgttgttctcagaattatggcagctgctgtttatggagcgctctgccctgctgtcgcat
ccgccctcctcagagtccgacccagatgacagtgagcaggtatctgctggtcagagccgt
ctttcgccggtgttggcaggagctgctgaggtcacagaaccggaggctccttctcaacct
gaacaggagaggtcaacccggcctgagcaaaggcctgcagtggaagggattgtgcagcag
tttttggccggcctgtttgccaacaacggaaaccccggtgctgcaccagctgcactatcc
aacatgctacagttgcactcaaaccctggggattatgcctggggtcagggaggtctggac
gctgtcatcacagagttattaggacagttggagaacacaggtccacctcctgctgagaag
gagatgatctcctccctgcctacagtttgcatctctcaagaacagacagcctgcagacta
gagtgtccagtttgcagggaggagtatttgtcaggggaatctgtcaggaagcttccttgc
ctccattacttccatagtgaatgtatagtgccttggctggagctgcatgacacctgccca
gtgtgccgcaaaagcctagaaggtatcgacaacagcctcccgcccacatcagatccccta
gaagctcgctccatcaggacagagcaacaggagagacaggcgatctga
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integrated database retrieval system
