Scomber japonicus (chub mackerel): 128373767
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Entry
128373767 CDS
T09718
Symbol
srsf4
Name
(RefSeq) serine/arginine-rich splicing factor 4 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128373767 (srsf4)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128373767 (srsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128373767 (srsf4)
Spliceosome [BR:
sjo03041
]
Common components
Common spliceosomal components
SR proteins
128373767 (srsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
128373767
NCBI-ProteinID:
XP_053189923
LinkDB
All DBs
Position
15:11511284..11517837
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AA seq
403 aa
AA seq
DB search
MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKEL
CGERVIVEHTKGPRRDGGYGGRSGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDLKDY
MRQAGEVTYADTHKGRRNEGVIEFRLYSDMKRALEKLDGTEVNGRKIRLIEDRPGARRRR
SYSRSRSRSRSRSRSRRSRKSRSRSESSSRSRSHSRAASRSRSRSRSKKNKGKNKKEEEE
RSNGAQKGKDRSRSRSPKSRSPKSRSPKSRSPKSRSPKSRSPKSKKSKKEGKKTKKDDSR
SRSRSRSRSRSRSGIKDRARKSGSKGRDPPKSDDEGGEPERGSRSRSRSPAESKSRARSK
SKSKSKSHSPSPVKARSRSRSASRSESRSKSRSPSRSRSRSRS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggtgtatatcggtcggctgagctaccgggcgagggagaaggacgtggagcgg
ttcttcaaaggctacgggaagatcctggaggtcgacctaaagaacgggtatgggtttgtt
gaatttgacgacccccgcgacgcagacgatgcggtctatgacctgaacgggaaagagttg
tgcggggaaagggtcattgtcgagcacacgaagggacctcgtcgtgacggaggctatggc
ggaaggagtggatatggacgttggggacgagacagatacggtcctccgataaggacagat
tatcggctcattgttgagaatctttccagccgctgcagctggcaggacctgaaggactac
atgaggcaggcgggggaggtgacttacgctgacactcacaagggacgcaggaacgaaggg
gtgatcgagttcaggctctactctgatatgaagagagctctggagaagctggacggcaca
gaggtgaacggcagaaagatccggctcatcgaggaccggccaggtgccagacgccgtcgc
tcttactctcgcagccgcagccgttccaggtcccgctccaggagccgcaggtctcgcaag
agccgcagccgtagcgagagcagcagccgcagccgctcccactccagagcggcttcccgt
tctcggagccgatcccgtagcaagaagaataagggcaagaacaagaaggaggaagaggag
cgcagcaacggagctcagaagggcaaggaccgcagcaggagccgcagccccaagagcaga
agccccaaaagccgcagccccaagagtcgaagccccaagagccgtagccccaagagccgc
agccccaagagcaaaaagagcaagaaagaagggaagaagaccaagaaagacgactccagg
tccagatctcgctctcgctccaggtctcgttctagatcggggattaaggatcgcgccagg
aaatctggctcaaagggccgcgacccgcccaaaagcgacgacgagggaggcgagccggaa
aggggctctcgctcccgttcccgctcccccgccgaatccaaatccagagccaggtctaaa
tcaaagtccaaatctaaatcccattccccttcacccgtcaaagcccgctcccgctcccga
tccgcctcccgttcagaatcccgctccaaatcccgctccccgtctcgttcccgctcccgt
tctcgctcctag
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