Scomber japonicus (chub mackerel): 128373918
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Entry
128373918 CDS
T09718
Symbol
nr1d2b
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2b
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128373918 (nr1d2b)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sjo03310
]
128373918 (nr1d2b)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128373918 (nr1d2b)
Nuclear receptors [BR:
sjo03310
]
1. Thyroid hormone like
1D. Rev-Erb
128373918 (nr1d2b)
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Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128373918
NCBI-ProteinID:
XP_053190089
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Position
15:27061034..27070369
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AA seq
593 aa
AA seq
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MESTKAGGVIAYISSSSSSSSPESCHSDSSNGSYQSSSPPHGSSSTRRQLGQPADPTLPG
GGQNLPGTQKNGRSSSTAKCGITKINGLVLLCKVCGDVASGFHYGVHACEGCKGFFRRSI
QQNIQYKKCLKNESCPIMRINRNRCQQCRFKKCLMVGMSRDSVRFGRIPKREKQRMLLEM
QSAMNNMMNNSQLHSSQELPIAKPLPACATQPTSGDTGPTPSSSPSSSPRSSQSDSSSDP
EPTVAMDTSPSSSSPSASDSGEEEVIGSVTRAHQETFMYNQEQSSLTSEAPPPSGLQNSG
AAKNTTSHRIEERQDSWNHHNNLVTMTTQDPPSSLGPQGPEVSSSSSHCPFRLSRSAASS
HCPAYAHGAFRAPSTEGPTNGAYSGPLWRGGNRMHLVCPMNTSPQVDPQKSGHEVWEEFS
HSFTPAVREVVEFAKKIPGFRDLSQPDQVSLLKAGTFEVLVVRFASLFDVKDRTVTFLGG
KKYSVDTLRAMGAGDLLNSMFDFSEKLINLGLSEEEMSLFTAVVLVSADRSGIENVNSVE
ALQETLIRALRSLITKNHPNESAIFTKLLLKLPDLRSLNNMHSEELLAFKVHS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgaccaaagctggaggcgtaatagcctacatcagctcatccagctcttcctcc
agccccgagtcctgccacagcgactcctccaatggcagctaccagtcatcctccccgccc
cacggctcctcatccacccgccgtcagctgggtcagccggctgaccccacactgcccggc
gggggccaaaacctgcccgggactcagaaaaatggacgctcatcctccactgcaaaatgt
ggtatcacaaaaatcaacggcctggtgctgctgtgtaaggtgtgcggcgacgtggcctct
ggcttccactacggcgtccacgcctgtgagggctgcaagggcttcttcaggaggagtatc
cagcagaacatccagtacaagaagtgccttaagaacgagagctgccccatcatgaggatc
aacaggaaccgctgccagcagtgccgctttaagaaatgcctgatggtggggatgtctaga
gactctgtgcgttttggccgcatccccaagcgtgagaaacagcgcatgctgctggagatg
cagagtgccatgaacaacatgatgaacaacagccagttgcacagcagccaggagctgccc
attgccaaaccgctgccagcctgcgccacccaacctacctcgggggacaccggccccacc
ccctcctcttctccatcgtcctcaccacgctccagccaatcagactccagctctgaccct
gaaccgactgtggccatggacaccagccccagctcatcctcgcccagcgcttcagacagt
ggggaggaggaggtgatcggctcggtaacaagagcccaccaggagaccttcatgtataac
caggagcagagcagcctgacaagtgaggccccgcccccctcaggcctgcagaacagtggt
gccgccaaaaacaccaccagccaccggatagaggagcgacaggattcctggaaccaccac
aacaacctggtcaccatgacaacccaagaccccccctccagcctgggccctcagggtcca
gaggtcagcagcagcagcagccactgccccttcagattgtccaggagcgctgccagcagc
cactgtcccgcctacgcacacggagccttcagagctccgtccacagagggccccaccaat
ggagcttacagcgggcccctgtggagaggaggcaacaggatgcatctggtttgtcccatg
aacacatctcctcaagtggaccctcagaagtctggccacgaggtttgggaggagttctcc
cacagcttcacccctgctgtcagggaggtggtggagtttgccaagaagatcccaggcttc
agagacctgtcccagccagaccaggtcagcctgctgaaggctggcacctttgaggtgctg
gtggttcgtttcgcctcgctgtttgacgtgaaagaccgcactgtcacgttcctgggcggg
aagaagtacagcgtggacaccctgagggccatgggtgccggggacctcctcaactccatg
tttgacttcagcgagaagctcatcaatctgggcctcagcgaggaggagatgagcctcttc
actgcagtggtgctggtgtctgcagatcgttccggcatcgagaacgtgaactcggtggag
gccctgcaggagacgctgatccgcgccctgcgaagcctcatcaccaagaaccaccccaac
gagtcagccatcttcaccaaactgctgctcaaactgcccgacctgcgctccctcaacaac
atgcactctgaggagctgctggccttcaaggtccattcctga
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