Scomber japonicus (chub mackerel): 128373923
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Entry
128373923 CDS
T09718
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128373923 (thrb)
04081 Hormone signaling
128373923 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128373923 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sjo03310
]
128373923 (thrb)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128373923 (thrb)
Nuclear receptors [BR:
sjo03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
128373923 (thrb)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
128373923
NCBI-ProteinID:
XP_053190093
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Position
15:complement(27084032..27210716)
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AA seq
415 aa
AA seq
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MSEPAENCSPHWKDEAIQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTI
QKNLNPTYACKYEGKCIIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEEN
RERRRKEELQKTAWDRLEPTQEEWDLIRMVTEAHMATNAQGNHWKQKRKFLVEEAMLLNE
ITCNLFYTSDQSAAGVKETKPEDIGQASMVNTPDGNKVDIEAFSQFTKIITPAITRVVDF
AKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGL
GVVSDAIFDLGVSLSSFNLDDSEVALLQAVILLSSDRPGLSSVERIERCQEEFLMAFEHY
INYRKHKLAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagcagaaaattgctccccccactggaaagatgaggccattcaaaatggg
tacataccaagttacctggacaaggatgagctatgtgtagtatgcggggacaaagctaca
ggctatcactatcgctgcattacctgtgaaggttgcaagggtttcttcaggagaaccatc
cagaagaacctcaacccaacctacgcttgtaagtacgaagggaaatgcatcatcgacaaa
gtgaccagaaaccagtgccaggaatgtcgcttcaagaagtgcatcgctgtgggaatggcg
accgacttggtgttggacgacagcaagcggctggccaagcggaagctaatcgaggagaac
cgggagcgccgtcggaaggaggaactgcagaagacagcatgggaccgactggagcccacc
caggaggagtgggacctcatccgtatggttactgaggcccatatggccacgaacgcccag
ggcaaccactggaagcagaagcggaaattcctggtcgaggaagctatgcttcttaatgaa
ataacatgtaatttattctatacttctgaccagagtgcagcgggggtgaaggaaactaag
cctgaggatattggtcaagcgtccatggtcaatacaccagatggaaacaaagtggatata
gaagccttcagtcagtttacaaaaattatcacccctgccataacccgagtggtggacttt
gccaaaaaactgcctatgttttgtgagctgccttgtgaagaccagatcatcctgttgaaa
ggctgctgcatggagatcatgtcactgcgagctgctgttcgctacgacccagagagcgag
accctcacgctcaacggggagatggcggtcacacgcggtcagcttaagaacgggggcctg
ggcgtagtgtcagatgccatctttgaccttggcgtgtcgctgtcctcctttaacttggat
gactctgaggtggctcttctacaggctgtcatcctgctttcatctgatcgtccgggcctg
agtagcgtggagcgaatcgaacgctgccaagaggagttcctgatggcctttgaacattac
atcaactaccgcaaacacaaattggcgcatttctggcctaagctgctaatgaaggtgacg
gacctgcggatgattggcgcctgccacgccagccgattccttcacatgaaagtggagtgt
cccaatgagctattccctcctctcttcctggaggtcttcgaggactga
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