Scomber japonicus (chub mackerel): 128373996
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Entry
128373996 CDS
T09718
Symbol
hoxa1a
Name
(RefSeq) homeobox protein Hox-A1a
KO
K09301
homeobox protein HoxA/B/D1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128373996 (hoxa1a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
128373996 (hoxa1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
128373996
NCBI-ProteinID:
XP_053190176
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Position
15:complement(20054541..20055999)
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AA seq
328 aa
AA seq
DB search
MSSFLDYSVMSGEGGSCSVRAFHSDHGITTFQSCAVSVNNCGADDRFMASRASPDGIPHQ
PGSYQSTASSLGLAYGAHPACSSSYGPQSFCTSYNHYALNQEVDSTAGFPQCGPLMYSGN
ISSSMVPQHRQGYSAAPLGQLQYAHAAYGGGHEQATPFPGCSNPLSPLHAAHLEACCSPL
SEGASSAQTFDWMKVKRNPPKTGRSGEYGYGGQPNTVRTNFTTKQLTELEKEFHFNKYLT
RARRVEIAAALQLNETQVKIWFQNRRMKQKKREKEGLLPAKAPSSDPGESVQEKMDDAAS
EKSISAPSTPSPSSSMVSSTGADPYSSN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctttttagactactcggtgatgagcggtgaaggtggctcatgctctgtcagg
gcttttcactcggaccacgggattacaacttttcagtcctgcgcggtttctgtcaacaac
tgcggggcggatgaccgtttcatggcgagcagggcttcccctgacggtatccctcaccag
ccggggtcataccagtctactgcaagctctctgggtctcgcttatggggcccacccggcc
tgtagctccagctatggaccccaaagtttctgtactagttacaaccattacgcgctcaac
caggaagtagactccacagcgggattcccacaatgcggccctctgatgtactcgggtaac
atttcctcctccatggtccctcagcatcgccaaggttacagtgccgcccccctgggtcag
ctgcagtatgcccatgcagcctatggcggcgggcatgagcaagcaaccccctttcctggg
tgctcaaacccgctgtcaccactgcacgcagctcacctggaggcatgctgttcacctcta
tctgagggcgcctcctctgcacaaactttcgactggatgaaagtcaagaggaacccacca
aagacaggaaggtctggggagtacggttatgggggtcagccgaacacggtccggaccaac
ttcaccaccaagcagctgacggagctggagaaggagttccacttcaacaagtacctgacc
cgggcgcggcgcgtagagattgcggctgcgctccagctgaatgagactcaggtgaaaatc
tggttccagaaccggaggatgaagcagaagaagcgagagaaggaagggctgctcccggcc
aaagctccatcttccgacccgggagagagtgttcaagagaaaatggacgatgcagcatca
gaaaagtctatctcagccccctctactccatcaccttcatcctccatggtgtcttctacg
ggggctgatccttactcctccaattaa
DBGET
integrated database retrieval system
