Scomber japonicus (chub mackerel): 128374045
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Entry
128374045 CDS
T09718
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04020
Calcium signaling pathway
sjo04148
Efferocytosis
sjo04218
Cellular senescence
sjo04310
Wnt signaling pathway
sjo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128374045 (nfatc1)
04310 Wnt signaling pathway
128374045 (nfatc1)
04020 Calcium signaling pathway
128374045 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128374045 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
128374045 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
128374045 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128374045 (nfatc1)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
128374045 (nfatc1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
128374045
NCBI-ProteinID:
XP_053190249
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All DBs
Position
15:11827208..11867423
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AA seq
872 aa
AA seq
DB search
MKSAEEDAYGYTPNVSLSLPLGNPCLPSQYHSLQSSPTISVSVTEPQSYDTQDDMRAPGY
YSSSSIRPNGAPTLESPRIEITAYGQFPEDEVEENNLPVAKRVNSIVTLTLPSADGYRDP
SCLSPASSISSRSCHSDASSYESSYSYNYDNSPQNSPWQSPSVSPKGSTLTLPGDGCGPG
GSPRHSPSTSPRTSVTDDTWIGQRGSRPNSPCGAKRKYSFNGSGASHKHYPYSPNHSPGL
SPQTSPRLSITEESWLPNTNQYTNSAILAAINALTTDGVADLGEGIPMKARKTSMEHNPT
VSLKLEPGGEELSPGELCQDEHPSNRLPLKKEGYCGGFLDVPQHPYSWPKQKQYVSPSLP
ALDWQLPSSSGPYRLQIDVQPKSHHRAHYETEGSRGAVKALAGGHPVVQLHGYMESEPLT
LQLFIGTADDRLLRPHAFYQVHRITGKTVSTPSHEALHNNTKVLEIPLLPENNMRAIIDC
AGILKLRNSDIELRKGETDIGRKNTRVRMVFRVHINQATGRTVSLQAASNPIECSQRSAQ
ELPLVDKQSLETCPAPGGERMLLDGHNFQHDSKVVFVEKAQDGHHLWETEAKVDKDASKP
NSLLIEIPPYRNQRLSTPVHVNFYVCNGKRKRSQYQRFTYVPASVPTIKTEPHDDYNAPL
VCAQRGPGLSLHPKPYFPPQVMTPMMTSDLRPCVVGGAYSVSQQRLAAKPSSLPPSSSPS
TSPKLHDLSPPPFSKCLSAVPAVQHPGQQSPIPHVSIIQETPGRYQPNLYPPSSSSSSPA
SQPSTPGTGPEAPFSPGSCMTPQPVSGSTSPSAQQHPKVPERGRSSLQEDGSPPSLAVSI
KQEPQELDQMYLDDVNEIIRNDLSSISVHSHA
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgctgaagaggatgcatatggctacacgccaaatgtcagtctctccctcccc
ctgggcaacccttgtcttccctcgcagtaccacagcctccagtccagccccactatatct
gtctctgtcaccgagcctcaaagttatgacacccaggatgacatgagagcgcccggttac
tattcatcttcaagcatccgcccaaacggagccccgaccctggaaagccctcgtattgag
atcacagcctacggtcagtttcctgaggatgaggtggaggagaacaaccttcctgttgcg
aaacgagtcaactccatagtgacgttgaccctccccagtgcagatggatatcgtgacccc
agctgcctgagtccggccagcagtatctcatctcgcagctgccactctgacgcatcctcc
tatgaatcaagctactcgtacaactacgacaactccccccagaactccccatggcagtcc
ccctcagtttcccccaagggctccaccctcaccctgccaggtgatggctgcggccctggt
ggttccccacgccattctccttccacctccccgcgcacaagtgtgacagatgacacctgg
ataggtcagcgtggttccaggcccaactccccgtgcggtgcaaagaggaagtacagcttc
aacggcagcggagcatcacacaagcattacccatactcacccaaccattctccggggctg
tccccacagacttctcctcgtctcagcatcacagaggagagctggctgccaaacaccaac
cagtacaccaactcggccatactggcagccatcaacgccttgaccacagatggagtggct
gaccttggggagggaatccctatgaaggcccggaaaaccagcatggagcacaaccccact
gtcagcctgaagctggagcctggaggtgaagagctgagtcctggtgagctctgtcaagat
gagcacccctccaaccgccttcccttaaagaaggagggctactgtggcgggtttctggat
gtgccacagcatccatacagctggcccaagcaaaagcaatacgtcagcccatccttgcca
gctctcgactggcagttgccatccagctcgggcccatatcgcctgcagattgacgtgcag
cccaagtcccaccaccgggcccactatgagacagagggcagcaggggagcagtgaaggcc
ctggcaggaggacacccagtcgttcagctgcatggttacatggagagcgagcctctgacc
ctgcagctgttcattggcacagctgacgacaggctcctgaggcctcacgccttctaccag
gttcaccgcatcaccgggaagacggtgtccaccccgagccacgaggccttgcacaataac
accaaagtgctggagatcccgcttttgccggagaacaacatgcgggccataatcgactgt
gcagggatcttgaagctgcgtaattcggatatagagctgcgaaagggggagaccgacatc
ggacgtaagaacacacgtgtgcggatggttttcagagttcacatcaaccaggccaccggg
agaacagtgtcattgcaggctgcatcaaaccccattgagtgctcccagagatcggcccag
gagctaccgctggtggataagcagagcttggagacgtgtcccgcccctggaggggagagg
atgctcctcgacggacacaacttccagcatgactccaaggtggtgttcgtggaaaaggct
caagatggtcaccacctctgggagactgaggccaaggttgacaaagacgcctcaaagcct
aattcgctcctgattgaaatccctccttatcggaaccaaagactctcaactcccgtccac
gtgaacttctacgtctgcaatggcaagaggaaaagaagccagtatcaacgcttcacctac
gttcctgccagcgtgccaacaataaagacagagccacatgacgactacaacgcccctctg
gtgtgcgcacaacgtggacctggcctgtctttgcacccaaagccatacttccccccacag
gtcatgaccccaatgatgacctctgacctcaggccatgtgtggtgggaggagcttactct
gtcagtcagcagagattggcagcaaagccatcctcactgcccccctcttcctccccgagc
accagccccaaactacatgacctatcaccaccgcctttctccaagtgcctctctgccgtc
ccagcagtccaacacccaggccagcagtccccgataccgcacgtctccatcatccaggag
acacctgggcgctaccagccgaatctctacccacccagcagctcttcctcctccccagcc
tcgcagccctccaccccgggcacaggtcccgaggcgcccttctctccaggcagctgcatg
acccctcagcctgtcagtggcagcaccagccccagtgcccagcagcaccctaaagtgcca
gagagggggcgctcctctctgcaggaggacggcagccccccttcactggctgtcagcatc
aaacaagaaccacaagagctggaccagatgtacctcgatgatgtcaatgagatcatcaga
aacgacctgtcaagcatctccgtccacagccacgcatag
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