Scomber japonicus (chub mackerel): 128374050
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Entry
128374050 CDS
T09718
Name
(RefSeq) lamin-A-like
KO
K12641
lamin A/C
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04210
Apoptosis
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128374050
09142 Cell motility
04820 Cytoskeleton in muscle cells
128374050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128374050
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
128374050
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Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
BRE1
TPR_MLP1_2
DUF2779
Motif
Other DBs
NCBI-GeneID:
128374050
NCBI-ProteinID:
XP_053190256
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Position
15:11660101..11669871
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AA seq
643 aa
AA seq
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MATPKNTPRGASSPLSPNRITRLQEKEDLCNLNDRLVVYIDKVRSLEAENAGLRVRITES
ETEISRELTGLKAAYETELADARQTLDSVAKERARLQLELGKLREDYKELKARNTKKESD
LTGALQRLKDLEALLNSKDASLTTALGEKRNLDVENRDLKTQVAKLDTSLGDARKQLQDE
MLRRVDGENRIQTLKEELEFQKNLHSEELRETKRRHESRMVELDNGHQQDYESKLAEALA
EMRSQHELQVKMYKDEMEKTYNAKLEGARQSADRNSHLVGAAHEELQQTRIRLESTSAQL
SQLQKQLAAREAKVRDLEDALSRERDTTRRLMGEKDREMAEMRQRMQQQLDEYQELLDIK
LALDMEICAYRKLLEGEEQRLRLSPSPPPTRVSGSRSSTSGAHSRSIHCSAQNSPVKRRR
PNDTDSEASSFAGGAVARTRITQQASASGRVTVDEVDLDGKYVRLSNKADEDQNLGNWQV
KRQVGSGAPIAFKFPAKFTLRAGQRVTIWASGTGGSHNPPSDLVWKTQPSWGTGDLFQTT
LISANGEEMAMRKVTRTQFEEDDDDMQVAHSTCGDGEYNLRSRTVVCGSCGLPSDKSSNC
SVSSASRSYRSGGLSEGLLPHSYVFSTSTPRKSGTRMESCPIM
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacccaaaaacactccccgaggtgcaagctcaccactatcccccaaccgcatc
acccggcttcaggagaaggaggacctgtgcaacctcaatgatcgtctggttgtctacatt
gacaaggtccgctctctggaggctgagaatgctggcctgcgtgtgcgcatcacagagtcc
gagacagagatcagccgggagttgacgggcctgaaggccgcctatgagactgagctggct
gatgcccgtcagactctggactcagtggccaaagaacgtgcacggctgcagctggagctg
ggcaagctgcgagaggactacaaggagctgaaagccaggaacactaaaaaggagtcggat
ctaacaggagcgttgcagaggctcaaagacctggaggccctgctgaactcgaaggatgca
tctttgacaacggctttgggagagaagcgtaacctcgacgtggaaaacagggatctgaag
acgcaggttgccaaactggacaccagtttgggcgatgccaggaagcagctgcaggatgag
atgctaaggagagtggacggagagaatcgcatccaaactctcaaagaggagctggagttt
caaaagaacctgcactctgaggagttgcgggaaacaaagcgacgccatgaatctcgtatg
gttgaattggacaacggtcaccagcaagactatgagagcaagctggcagaggctttggct
gagatgcgtagccagcatgaactgcaggttaagatgtacaaggatgagatggagaagacc
tacaatgctaagctggaaggtgcgcgtcagtcggcggacaggaacagccacctggtggga
gcagcacatgaggagcttcagcagactcgaatccgcctggagtccacatctgctcagctc
agccagctgcagaaacagctggcagctcgtgaggcaaaggtgagggacctggaggatgcc
ctgtctcgagagcgggacaccacacgtcgcctgatgggagagaaagacagagaaatggct
gagatgaggcagcggatgcaacagcagctggatgaatatcaggagcttttggatatcaag
ctggccctggacatggagatatgtgcctacaggaagctgctagaaggagaggaacagagg
ctgcgtctctcccccagccccccaccgactagagtgtcaggaagtcgctcctctacatca
ggagctcactctcgatcgatccactgcagcgctcagaactctcctgtcaagaggcgccgc
cccaacgacactgacagcgaggcctccagctttgcaggaggtgctgtggcccgcacccgc
atcacccagcaggcctctgccagcgggcgggtcactgtggatgaggtggatctggatggg
aaatatgtcagactcagcaacaaagcagatgaggatcagaatttggggaactggcaggtg
aagcggcaggtaggatctggtgcacccattgcattcaagttccctgctaaattcactttg
agggctggccagagggtcacgatctgggcctctggtactggtggatcccacaatcctccc
tctgacctggtgtggaagactcaaccttcctggggcactggagacttgttccagaccacc
ttaatcagtgccaatggagaggaaatggcaatgaggaaggtcacccgcacacagtttgaa
gaggacgatgatgacatgcaggtggctcacagcacctgtggagatggcgagtacaacctg
cggagccgaacagtggtgtgcggctcctgtggacttccctcagacaaatccagcaactgc
tctgtgtcttcagcttcccgctcctaccgcagcggtggcctttctgagggtttactgcca
cactcttacgtgttcagcactagcacacctcgcaagagtgggaccagaatggagagctgt
ccaatcatgtga
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