Scomber japonicus (chub mackerel): 128374084
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Entry
128374084 CDS
T09718
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03022
Basal transcription factors
sjo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128374084 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
128374084 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjo03021
]
128374084 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128374084 (gtf2h4)
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128374084 (gtf2h4)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128374084 (gtf2h4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
128374084
NCBI-ProteinID:
XP_053190304
LinkDB
All DBs
Position
15:29805077..29825988
Genome browser
AA seq
473 aa
AA seq
DB search
MMKLRVQLHCKNLHEYLRELSPEILDRLYNHPATCLAVYRELPDLAKNYVMRMLFLEQPL
PQAAVALWVKKDSQKDHDECVSVLAGLRLWHSQQLQGGLQGYILNPVFKDNLRIALLGGG
TAWADEGSSLGPDRHARDIESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLVQAGLMK
SESGEAPYITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMDLVEILSFLFQLSFSTLGR
DYSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTTNSSSSSSSSSS
SSSSNMGSTPGTGDAGFIVVETNYRIYAYTSSELQIALVALFSEMLYRFPNVVVAQVTRE
SVQQAIANGITAQQIIHFLRTRAHPVMLKQTPVLPSTITDQIRLWELERDRLQFTEGVLY
NQFLSQADFEVLRDRAQGLGCLVWQDVAHRVMVVTPQGHSEVKRFWKRQKSHT
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagctgcgtgtccagctgcactgtaagaatctacatgaatacctgagagagctc
agtcctgagattttggacagactctacaaccatccagcaacatgtctggctgtctacagg
gagctccccgatctggccaagaattatgtgatgcgcatgctgttcctggagcagcctctc
ccacaggctgcagtggcattatgggtgaaaaaagacagtcaaaaggaccatgatgaatgt
gtctcagtgttggcaggactccgcctttggcacagtcagcagctgcagggtggtctacag
ggatacattttaaatccagtgttcaaagacaacctgaggatagcactgctcggcgggggc
acagcatgggcagatgagggcagctctctgggtcctgaccgccacgcccgggacatcgag
agcctggaccgctatgccatggaacgttgggaggtcattctgcacttcatggtgggctct
cctagtgctgctgtgagtcaagacctggctcagctgctggttcaagcaggactcatgaag
agtgagtcgggggaggcaccctatatcacctcagctggtttccagttcctgctgctggac
acagcctctcagctgtggtacttcaccctgcagtatctcaaaactgctcagtccagaggg
atggacctggtggagatcctgtcattcttattccagctcagcttctccactctgggcaga
gactactcagtggagggaatgagtgagtcattactcaccttcctgcagcatctgcgggag
tttggactggtcttccagaggaagaggaaatcgaggcggtactaccccaccagactggcc
atcactctggctgcaggagtcactaccaactcctcttcctcctcctcttcctcctcttcc
tcctcttcttctaacatgggatccactcctggtactggagatgctggtttcattgtggta
gaaaccaattatcgtatctacgcttacacaagctcagaacttcagatcgctctggtggct
ctcttcagtgaaatgttgtatcgcttcccaaatgtagtagttgctcaggtcacaagagag
tcagtgcaacaggccattgccaacggcatcactgcacaacagattatccacttcctgaga
accagagcacaccctgtcatgctcaaacagaccccagtgctgccttcaaccataacagat
cagatccgactgtgggagctggagagagatcgactgcagttcacagaaggagtgctctat
aaccagttcctctcccaggctgactttgaggtgctgcgagacagagctcagggtctgggc
tgtctggtgtggcaggacgtggctcacagggtgatggtggtgacaccgcagggacacagt
gaggtcaagaggttctggaaacgacagaagtctcacacgtaa
DBGET
integrated database retrieval system
