Scomber japonicus (chub mackerel): 128374145
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Entry
128374145 CDS
T09718
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128374145 (snx13)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
128374145 (snx13)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
128374145
NCBI-ProteinID:
XP_053190385
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All DBs
Position
15:18842897..18865473
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AA seq
966 aa
AA seq
DB search
MSNVPQQRVSTSQQTQASLSIWGWGGLGVVLFLVTFGPFAIFYLAFYIFCFIGGGFAVTL
LYGKINSEKHLEKCEHSYLPPTQIGIVKTLDEMRLEMKPIKIDRRLTGSSFIDEPLQQVI
QFALRDYIQYWYYTLSEDESFLLEIRQTLQNALVQFSTRSKEVDWQPYFTTRLVDDFATH
LRVFRKAQDRLADREDKQRDITDELVDSFFEAEVEMERKICRDVVCTSHKDEEGFLRDLC
ELLLYLLLPPGDFHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIRDSSCNYE
AFMNILKLTDKPAELEAVKDKVLEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRI
QRLHSGKEVDALKLAANFGKLCVIPLDHILVHNIALQFFMDFMQAAGAQAELFFWLTVEG
YRVTAQQQLEAMLGWQKDGKKQPSATKGLLKAAALGVYEQYLSDKASPRVQVDELSVIQL
GEALQKDDPTPEIFDDIQRKVYDMMLRDERFYPSFKQSPLYVRMLAELDMLKEPSYRGSD
DGDGESFNGSPTGSINLSLDDLSNSCHDETMHLHAFISDTGVCNDHGKTYALYAITVFRR
TQDGSEDCWKTYRRYSDFHDFHMRITEQFENLASILKLPGKKTFNNMDRDFLEKRKKDLN
AYLQLLLNPEMVKACPTLIPYVYDFLENKAYSKGKGEFARKIDTFVNPLRSSMRNVSNAV
KALPDSLAEGMTKVSDNMGRMSERLGQDIKQSIFKVPPLLPKSDIDPEHCRVSAQLDDNV
DDNIPLRVMLLLMDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDYMTSP
EQVADYVKKFRDSYWPNGILAETPPRRDKNIRMRTRIAAKTSLLGIMPDELKHIIGADTT
RKGILRVFDMFQYQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLHSRSPRIHRYSQKLK
SSSLKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgtccctcaacaacgagtttctacatcacaacaaacacaggccagtctgtcc
atctggggatgggggggtcttggagtcgtgctgttcctcgtcacctttggaccctttgcc
atattctacctggccttttatatcttctgcttcattggagggggctttgcggtcacgctg
ctctatggaaagatcaactcagagaaacacctggagaagtgcgagcactcttacttgccg
cccactcaaattggtatagtgaagacgttggatgagatgcggctggagatgaagccgata
aagattgacaggagactgactggctccagtttcatagatgagccactacaacaggtgatc
caatttgctctgagagactatatccaatactggtactacactctgagcgaagatgagtcc
ttcttattagagatcaggcagacgctgcagaatgccctcgtccagttttccacacggtcc
aaagaggtggactggcagccttacttcaccactcgcctggtggacgactttgccacccat
ttacgtgtctttcgaaaagcccaagatcgcctcgctgacagagaggacaagcaaagggac
ataacagacgagctggtggactcgttctttgaggccgaggtggagatggaaaggaaaatt
tgtcgagatgtagtgtgcacttcacacaaagatgaagaaggtttccttcgggacttgtgt
gagttgcttctgtatctgttactacctcctggagatttccacaacaagaacatgagatac
ttcctacgggaagtgctggcgcgtggtgtgctgcttcctctcatcaatcagctgagcgac
ccagactacatcaatcagtttgtcatctggatgattcgggattccagctgtaactatgaa
gccttcatgaacatcctgaagctgacagacaagcctgctgagctggaggccgtaaaggac
aaagtgctggaggagctgcagtacctccgctcgctggacacagcaggagatgacatcaat
gtaatcaagaaccagattaacagtcttctgtttgtgaagaaggtgtgtgagaccaggatc
cagagactacattcgggcaaggaggtggatgccttgaagctggcagccaatttcggcaag
ctgtgtgttattccgctggatcatatccttgtccacaacattgccctgcagttcttcatg
gatttcatgcaggcagcgggggcccaggcagagctattcttctggctcactgtggagggc
tacagggtgacggcgcagcagcagctggaggcgatgctgggctggcagaaagatggcaag
aagcagcccagtgccaccaaggggctgctgaaagccgctgcactgggtgtctatgaacaa
tacctctctgacaaggcgtctcccagagtgcaagtagatgaattatcagtaatacaactg
ggggaggcgctacagaaagacgaccccacacctgagatatttgatgacatccagagaaag
gtgtatgacatgatgctgcgtgatgagcgtttctacccctccttcaagcagagtcctctg
tacgtacgcatgcttgcagagctggacatgctgaaagagccgagctaccggggatctgat
gacggcgacggggaatctttcaatggctctccaacaggaagcataaacctatctttggac
gacttgtccaactcctgccatgatgaaactatgcacctacatgccttcatctccgacaca
ggggtttgcaacgaccacggtaagacctacgcactctacgccatcactgtgttcagacgc
acccaagacggcagcgaggactgctggaaaacctaccggcgctactctgacttccatgac
ttccatatgaggatcactgaacagtttgagaacctggcgtccatcctcaagctgccaggg
aaaaagactttcaacaacatggacagagacttcttggagaagagaaaaaaggacctcaat
gcttatttacagttgctgctgaacccagagatggtgaaggcctgcccaactctgattcct
tatgtctatgacttcttagagaacaaggcctacagcaagggcaaaggagagtttgctcgc
aagatagacacatttgtgaatcctctccggagctccatgaggaacgtgtccaatgcagtg
aaggccctgccagacagtctggctgagggtatgaccaaagtctctgacaacatgggtcgc
atgtcagaaagactgggccaggacatcaaacagtcaatattcaaggtgcctccactcctc
cccaagtcagacatcgaccctgaacactgtcgagtctccgctcagttagacgataacgtc
gatgataacattccactgcgggtaatgctgctgctgatggacgaggtgtttgatctcaag
gagaaaaaccagtggctacgcaggaacattaagaacctgctgcagcagctcatcagggcc
acatatggagacaccatcaacaggaaaattgtggaccatgttgactacatgacctcacca
gagcaggtggcagattatgtcaagaaatttagggattcttactggcccaatggtattctg
gctgagacgccaccccgtcgggacaagaacatccgcatgaggacacgaatcgccgctaag
accagcctgctgggtatcatgccagatgagctgaagcacatcattggggcggacaccacg
cggaagggcatactgcgcgtcttcgacatgtttcagtaccaacccatgaaccgtcgtctt
gtctacgttttcctggagggcttcttggagaccatgttccctcagtacaaattccccgag
ctctttgtcaagttgcactcccgctctccacgcatacacagatacagccagaaactcaaa
tcctcctccctcaagaggtga
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