KEGG   Scomber japonicus (chub mackerel): 128374150
Entry
128374150         CDS       T09718                                 
Symbol
polr1f
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA43
  KO
K03004  DNA-directed RNA polymerase I subunit RPA43
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    128374150 (polr1f)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sjo03021]
    128374150 (polr1f)
Transcription machinery [BR:sjo03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     128374150 (polr1f)
SSDB
Motif
Pfam: RPA43_OB SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 128374150
NCBI-ProteinID: XP_053190390
LinkDB
Position
15:18808827..18814439
AA seq 379 aa
MANLEHVEGDPKHVKMSSEIPAACAEEQLAGVSSKPDTDAGAVPSFAAASELLSAPYSCL
VMNTHRRHIALPPMYLNKKKTGIKEELEAELLKFSESLKGVPLAYDNIKIVEQHGHIYDD
SGYIHMDIEASFIVFQPKKGQTLLGKVNKLSVSHVGCLVHGCFNASIPKPNLVSVETWRD
AGPRIGTEIEIEVTTLDADTAGVLLIRGRLDRTKVQELLAMGESSESTLPADQQEPPDTE
PAPEPTKESPEDTPKKKKNKKKDKVKEEEREEEVAVTPSCQPDGNTTLELNGTTDKDANG
NEAGEKKKKKKKKEKQLKEEAEEVELSPLEIHGSDSSGYHSDKANKKRKHETGSDVTSGF
SEESEPPKSKKKRKIEQFA
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggcgaacttagagcatgttgaaggcgacccaaaacacgtgaaaatgtctagcgaaatc
cccgctgcttgcgccgaagagcagctggccggagtgtcctctaagccggacacagatgcg
ggcgcggtcccgtcgttcgccgccgcctccgagctgctatcagcgccgtactcgtgtctg
gtcatgaacacgcatcggagacacatcgccctgccacccatgtacctgaacaagaagaag
acaggaataaaggaggagctggaggccgagctgctcaagttctcagagagtctgaaggga
gttcctttagcttatgacaacatcaagatagttgagcagcatggacacatttacgatgac
agcggctacatccacatggacatagaggccagctttattgtatttcagcccaaaaaagga
cagacactgttgggtaaggtgaataaactaagtgtaagccacgtgggctgcctggtgcac
ggctgcttcaatgccagcattcccaaacccaacctagtctctgtggagacctggagggac
gcagggccgaggatcggcactgagatagagattgaggttaccacactcgatgctgacact
gcgggggtcctgctgatcagaggaaggctggacagaaccaaggtccaggagctgctggct
atgggtgagagctcagaatcgaccctccctgcagaccagcaagagccgccagacacagaa
cctgccccggaacccaccaaggagtctcctgaagacactcccaagaaaaagaagaataag
aagaaagacaaagtcaaagaagaagagagagaagaggaagtggcagtaacaccctcctgc
cagccggacggtaacacgacattagagctgaatggaacaacagacaaagatgcaaacggc
aacgaagccggcgagaaaaagaagaagaaaaagaagaaggagaagcagctgaaagaagaa
gcagaggaggtggagctctctcctttggagatccacggcagcgactccagcggttaccat
agcgacaaagcaaacaagaaaagaaaacatgaaactggtagcgacgtcacatcaggtttt
agtgaagaatcggaaccaccaaagtccaagaaaaagaggaaaatcgagcagtttgcctaa

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