Scomber japonicus (chub mackerel): 128374200
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Entry
128374200 CDS
T09718
Symbol
jarid2b
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128374200 (jarid2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128374200 (jarid2b)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
128374200 (jarid2b)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
128374200 (jarid2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
TfoX_C
Sec23_BS
Motif
Other DBs
NCBI-GeneID:
128374200
NCBI-ProteinID:
XP_053190445
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All DBs
Position
15:15712302..15818052
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AA seq
1460 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVMRKVLYLSLKEFRTAQKRQLDGDGTTNSNGSL
ANGQLNGSGSKGSHKEDGSLRSQGMDGSNEYCEDGPAKKRPRLQAQRKFAQSQPNSPSTT
PVKVAEPSSLSTGQATVPSSLSSLSSSSLSCSIQDLSRRKPKTEDFLTYLCLRGSSALPS
NMAYFGSSQEEEDLEEDEDEEEEEVRNGGGTHAHGGASSSQASASSSCHSTPRKGKLPAR
QPLNGHVFNNHGKAGTRESPRPKAGTHGRDAPAPPLPPPPPPPPPLLRERSERAEAREHA
RVQQAMASGRGSANGLPPRRAAEELRKQVTKVNGLTRAGSAQAVSGAKKSRDFRLPSKTV
KKYTATVSKGHVTYTKAKQKELGKKTKLSSSNKHNSSASASSSANNHNQHSQPAASNGLA
NSGKAVAPAHHSNAKTRKQVLLSNGLHNVGVRLNGRLNGQRHNTLAKEDGQRQCQQGQGE
CPGREGLRNSKRRLEVVLNSVGIGGVEQRAKTPGTEAKKAKIQSTPLETRSSSKKVANQE
KSATQTTTPTTPVSNGHVSETPSSPTQTPPATPIPPPTPPPQRTPPSSIPAANVEPVNQR
PKRASAGKLMLIRQAQQQQSRSHSRSSSSSSPSSGQNHPQIPSRASTTSDPQQTSVSSST
TTSSLLTSTNSPGQLKPAALRPADRDKEWEREKEMFRQKEREQEKEWDSQRSRPEGWTAL
AEVPIFRPMPREFQDPLVYLDAVREQAEWTGMCCVVPPQDWRPECKLSEEMRFVTQAQRV
HMLGRRWGPNVQRLACIRKHLKSQGITMDEPPVIGGCEVDLARFFQLINDMGGMQQVMDL
KKWTKLADLLRIPKSAQDRLAKLQEAYLQYVLSYDSLSSEERIRLHAEVLQEKKQLESRR
GPLEGLLDSLAPSALVLPRYEPKNGLVGGVVGGATGNHRTNGVYHHLKELKARVKAGRRQ
LFPQVKQRKEDRQHGEEQEEEDRGILGDQHKCIYKGKSVSLTNFFRIARNTMTMCFNKEP
GAAEVEQEYWRIVEQRDSHVAVHCGKVDTSTHGSGFPTGKSEPFSKHGWNLTVLPNNSGS
ILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNRLPYIDYLHTGADCIWYSIPAEEKAKLD
KVVHTLLQANGTPGLEMLEKNIMISPEVLCREGIKVHRTVQQSGQFVVCFPGAFVAKVCC
GYCVSETVHFATPHWMNLGYQAAKDLKCRRIAKPFSMEKLLYQIATAESKRDNGLLLTTI
SALLKDLRNIEMRQRQELYKAGLHSTARYGTHDGSLGPGEGRKKPRGKWLALESSERRCQ
ICQHLCYLSMVVQETDNVVFCLECALRYVEKHKSCRGLKMMYRYDEEQINSLVNQVCGRA
MLKSGGGGAVVVGGGGGVGVGVGGGGGGGGGGGGGGGDPCHALTPAKASPAKRGPRKRAT
VEVSLARLSSSHIPKAAAVS
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacctaagaggaatatcattcaaaagaaatatgatgacagtgatggg
atcccgtggtcggaggagcgggttatgcggaaggtgctttacctctccctaaaggagttt
aggactgcacagaaacggcagctggatggtgacggcaccacaaactccaatggttcccta
gccaatgggcagctgaatggctctgggtcaaagggcagccacaaagaagatgggtccttg
cgctctcagggcatggatgggagcaacgagtactgtgaggatggtcctgctaagaagaga
cccaggctccaggcccagaggaagtttgcccagtcgcagcccaactcacccagcactacg
cccgtcaaagttgccgaacctagcagcctgagcaccggccaggccaccgtgccctcctct
ctctcatcactctcctcttcatccctgtcctgctccattcaggacctgtctagacgcaaa
cccaagacagaggacttcctcacctatctctgcctcagaggttcatcggccctgcccagc
aacatggcctactttggaagctcccaggaggaggaggacctggaggaggacgaggacgaa
gaggaggaggaggtgaggaacggaggtggtactcacgcccatggtggggcaagcagcagc
caagcctcagcctcctcctcctgccactcgacaccccgcaagggcaagctccctgccagg
cagccactcaatgggcatgtgttcaacaaccatggtaaagcagggacaagggagagtccg
aggcccaaggctgggactcacggcagggatgcgcctgccccaccactgccacctcctccg
cctccacctccacccctcctgagggaacgcagtgagcgggcggaggcccgggagcatgct
agggtgcagcaggccatggccagcggtcggggctcagccaatgggctgccaccaaggaga
gctgctgaggagcttcgcaagcaggtcactaaagtgaacgggctgacgcgggcgggctcg
gcacaagctgtcagtggggccaagaagagccgcgacttccgattgccgtccaaaactgtg
aagaagtacacagccaccgtgtccaagggtcatgtcacctacaccaaagccaaacagaaa
gaactaggcaagaaaaccaaactcagcagcagcaacaaacacaacagctccgcttcggca
tcatcgtcagcgaacaatcacaatcagcacagccagccagcagccagcaatgggctggcc
aactcaggaaaagcagtggcaccagcccaccacagcaatgcaaaaacccgcaaacaggtg
ctactatccaatgggctgcacaatgttggcgtccgcctcaatggcaggctaaatgggcag
cggcataataccctggccaaggaggacgggcagagacagtgccagcagggccagggggag
tgccctggtcgagagggactgcgtaactccaagcggcgtctggaggtggtgctgaactca
gtggggatagggggtgttgagcagagggccaaaacccctggcactgaggccaagaaggcc
aagattcaatccacgcctctggagacacgcagcagcagcaagaaggtagccaatcaagaa
aaatctgccacacaaaccaccacccctaccactccagtttctaatggacatgtatcagaa
acaccctcttctcccacacaaaccccgcctgctaccccaattccacctcctactccccct
cctcaacgaaccccgccttcttctataccagcagccaatgtggagccggtgaaccagcga
cctaagcgggcatcagctggcaagctgatgttgattcgacaagcacagcagcagcagagc
aggtctcacagtcggagctccagctcatcctccccttcatcaggccagaatcacccacag
atcccaagtcgtgcaagcactacctcagacccccaacaaacctctgtatcctcctccacc
accacatcctctctgcttacttccacgaacagccccggacagctcaaaccagcagcattg
cggcccgctgaccgtgacaaagagtgggaacgtgagaaagagatgtttcgccagaaggaa
cgcgagcaggagaaggagtgggactcgcagcggagcaggccagagggctggacagcgctg
gctgaagtccccatctttcggccaatgccgcgggagttccaggaccccctggtgtacttg
gatgcggtgagggaacaggccgaatggactggcatgtgctgtgtggtaccaccacaagac
tggcggccagagtgcaagctgagcgaggagatgcgttttgttacacaagcgcagagggtc
cacatgctgggacggcgctggggccccaatgtgcagcggctggcctgcatccggaagcac
ctcaaatctcagggcattaccatggatgagccacctgtcattggtggctgtgaagtggac
ctggcacgttttttccagctcatcaatgacatgggcggcatgcagcaggtgatggacctg
aagaagtggaccaagctggccgaccttttgcgcatccccaagtcagcacaggaccggctg
gccaagctacaggaggcatacctccagtatgtgctctcctatgactcgctcagctctgag
gagcgcatccgactgcatgccgaggtgctgcaggagaaaaagcagctagagtcgcgccgg
ggacctttggagggtcttttggactccttagcaccaagcgcgctggtgctgccacgctat
gagcccaagaatgggcttgtaggtggtgtggtgggaggggcaacagggaaccaccgcacc
aatggagtgtatcaccatctgaaggagctgaaagctcgggtcaaagcgggccggcgccag
ctcttccctcaggtaaaacaacgcaaagaggacaggcagcatggagaggagcaggaggag
gaggacaggggtattctcggtgaccagcacaaatgtatttacaaggggaaatcggtgtct
ttgacgaacttctttaggatagcccggaacaccatgaccatgtgctttaacaaggaaccg
ggggctgctgaggtggagcaagagtactggaggattgtggaacagagagacagccacgtg
gcagtgcattgtgggaaggtggacaccagtacacatgggagtggtttccccacaggaaag
tcagagccattttcaaaacatggatggaacctcactgtcctccccaataactctggatcc
attctgaggcatctgggtgctgtgcctggggtgaccattccctggctaaacattggcatg
gtcttttctacctcatgctggtctcgagaccaaaatcgccttccatatattgattactta
cacactggtgctgattgcatttggtattctatccctgctgaggagaaggctaagctggac
aaggtggtccatacactgcttcaggccaatggcaccccaggactagaaatgttggagaag
aacataatgatctctccagaggtgctgtgccgcgaaggcatcaaggttcaccgcacagtc
caacagagcggccagttcgtggtctgcttccctggtgcctttgttgctaaagtgtgctgt
ggctactgcgtgtcagaaacagtgcactttgccacaccgcactggatgaacctgggttat
caggctgcaaaggacctgaaatgtcgtcgtatagccaaacccttctccatggagaagcta
ctgtaccagatcgccacagccgagtccaagagggacaatggccttctcctcaccaccatc
tccgcccttctcaaagacctcaggaacatagagatgcgtcaacggcaggaactttacaag
gcgggtctgcactccactgcccgatacggcacccatgatggcagcctggggcctggtgag
ggacgcaagaagccccgcggcaaatggctggcactggagtcctcagagagacgctgtcag
atctgtcagcatctctgctacttgtccatggtggttcaggagactgacaatgtggtcttc
tgtctggagtgtgccctgcgctatgtggagaagcacaagtcctgcagaggccttaagatg
atgtaccgatatgatgaggaacaaatcaacagtttggtgaaccaggtgtgtggccgggcc
atgttaaagagtggtggcggtggtgcggtcgttgttggaggaggaggaggagtaggcgta
ggcgtaggcggcggaggaggaggaggaggaggaggaggaggagggggaggggacccctgc
catgccctcacccctgccaaagcatcgccggccaagcgaggtcctcgaaagcgggccact
gttgaggtgtccctggcacgcctgtcctccagccacatccccaaggctgcggctgtgtcc
tga
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