Scomber japonicus (chub mackerel): 128374201
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Entry
128374201 CDS
T09718
Symbol
atxn1a
Name
(RefSeq) ataxin-1a
KO
K23616
ataxin 1/1L
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128374201 (atxn1a)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
128374201
NCBI-ProteinID:
XP_053190447
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Position
15:complement(15920418..16012626)
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AA seq
823 aa
AA seq
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MKSNQERSNECLPPKKREIPASTLPSENRSPVIPPASDSQRTENMAWLASVAGGNERSMS
GHCSSSQSDGPQYKSLSSTSDSLSSSSSLRLVSSLPTVYTSPLSQSTVGGTVHYTQLPPN
LQFIASPYTAPYTGYVSPHLLPPPPPPPPLSSSSSLATQRSSHIETASALTQTSKHDQQR
ASIGRTSMPPPSTDPAPHYVQMSTSPRTVPSLHHQGGAHLPPPSLHPHHTLGHGMSQVVV
QYTDGHTRKEDGGSRPRELHNGGLERGRRYGASPESSLSKPGSKSRDATSSLSSSAYEAR
HLVLPSDYCTHDPSGLRTSVMLMPNSHRDHQLVPPRASPEKLTTSATAHLEKGGIILGKP
VNRTPSSSNTTSSFTFPPPLSVDSLKAAVSSLSPQTVIQTTHNSTEPLSMGLPSTSIYPQ
PPIIGYIAGGSGSQHTPISYHTSLQQHLLIPGAQQVIIPVSGGGVTTLEPVTSHVTSSSQ
AAPFPTTLPHTYIAAPVPKGETLETPSGTYHQAASGAVVQAQLHLPIVPAPPGLVAPSVP
PPPSSTVAPPALPPYFIKGSIIQLADGELKRVEDLKTEDFIQSAEISSELKIDSSTVERI
EGSHTSPNFAVVQFSVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPDRTTQLLELPCTKLS
VGDVCISLTLKNLKNGSLKKTQPLELTNPASVPASSHGHLKPPRAVIDTPQSCSGGGSRH
GERENGISQRGSGGSGNGSVRGANVENGDVMFGERGSVSKSQVATNAEAGSSKPSGGRKR
RWSAPEGRKVEKSEEEPPLTLPKPSFIPHEVKVSIEGRSNIGK
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccaggaacgcagtaatgaatgtctgcccccaaagaagagggagatccct
gcaagcacattaccatctgaaaatcgctcacctgttataccacctgccagcgatagccaa
cgcacagagaacatggcctggctggctagtgtggctggtgggaatgagaggagcatgagt
gggcactgtagctccagtcagtctgatgggccccagtataaatccctctcctccacatca
gactccttatcctcctcttcctcactaaggctagtctcatctctccccacagtgtataca
tcccccctgtcacagtccacagttggaggaactgtccattacacccaactgcctcccaat
ctgcagtttatagcctcaccctacactgccccatacacaggctatgtctctcctcatctg
cttccacctcctcctccaccaccccccctctcctcctcctcatctctggccacacagaga
tcctcacacatagagacagcctctgctcttacgcagacctccaaacatgaccagcagcga
gcatccattgggcgtacatccatgccaccgccttctacagaccctgcccctcactatgtt
cagatgtcaacctctccacggactgtgccgtcgcttcatcaccaaggaggtgctcacctt
ccacccccgtcactgcacccccatcatactttagggcatggtatgtcccaagttgtggtg
caatatacagacggacacaccagaaaagaggacggtggctccagacccagagagcttcac
aatggaggcctggaaaggggccggcgatatggtgcatcccctgagtccagcctctctaaa
cctgggagcaaatcacgggatgccacctcttctttgtcctcatcagcgtatgaggcccgc
catctggttctgccatccgactactgtactcatgatccctcagggctgagaacctctgtc
atgctaatgcctaacagccacagggaccaccagctggtaccacccagagccagccctgag
aagttgacaacctcggccaccgcacacctggagaaaggtggaatcatcttgggcaagcct
gtcaatcgcaccccctcctcctccaacaccacctcctctttcacttttccacccccatta
agtgttgacagcctgaaagctgctgttagttcactgtcacctcagaccgtaatccagacc
acccacaactctacagagccattgtcaatggggctgccttccaccagtatctacccccag
ccacctatcattggttatattgcaggtggcagcgggagccagcatacgccaatcagctac
cacaccagcctacaacaacacttactcattcctggcgcccaacaggtcattatccctgtt
agcggaggtggagtcaccacattggaacctgtaacctcccatgtgacatcatcctcccaa
gctgcaccatttcctaccacactcccacacacatacattgctgccccagtccccaaagga
gaaactctggaaactcccagcggcacgtatcaccaggccgcttcaggtgcagtggtccaa
gcccagcttcatctccccattgttcccgctccaccagggctggtcgccccttctgtgcct
cctcccccgtccagtacggtggctcccccagcactccccccatatttcatcaagggctcc
atcatccagctggccgatggggaactgaaacgtgtggaggacctgaagactgaggacttc
atccagagtgcagagatcagcagtgagctgaagatcgactcatccacagtggagcgcatt
gaagggagccacacctcacccaattttgctgtggttcaattctctgttggtgagcaccgt
gcacaggtgagtgtggaggtcttggtggagtaccccttcttcgtctttggccaaggctgg
tcttcatgctgtccagaccggaccacccagctcctggagctgccttgcaccaagctttct
gtgggcgatgtttgtatttcactcaccctcaagaacctgaagaatggatctctgaagaag
actcagcccctggagctgaccaaccctgcctctgtcccagcctccagccacggccacctc
aaaccccccagagctgtcatagacactcctcagagctgcagtggaggaggctccaggcat
ggggagcgggagaatggtatcagccaacgggggagtggcggaagtgggaatgggagtgta
cggggagctaatgtggaaaatggggatgtcatgtttggggaaagagggtcagtttctaag
agtcaggttgccaccaatgcagaagctggctccagtaagccatcaggaggcagaaagagg
aggtggtcagcccctgaaggtcgaaaagtagaaaaatcagaggaggagccacctttgacc
ctgcccaaaccttccttcatccctcacgaggtgaaagtcagcatcgagggaaggtcgaat
attggcaaatga
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