Scomber japonicus (chub mackerel): 128374238
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Entry
128374238 CDS
T09718
Symbol
hoxa3a
Name
(RefSeq) homeobox protein Hox-A3a isoform X1
KO
K09303
homeobox protein HoxA/B/D3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128374238 (hoxa3a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
128374238 (hoxa3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
128374238
NCBI-ProteinID:
XP_053190489
LinkDB
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Position
15:complement(20065128..20069772)
Genome browser
AA seq
415 aa
AA seq
DB search
MQKATYYDSSAIYSGYPYQSANGFSYDANQVQYPRASHVESEYHRPACSLQSPDGSVALQ
KPGEMAESCDRTTAIQAAQSKVHPESNQPQVPVSGPPPPSQSPGAISQNTSNGSNQPSAK
NGSPTSSTHGKQIFPWMKESRQNTKQKPTSSSSSVESCPGDKSPPGSAASKRARTAYTSA
QLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGVGMMPSPGG
QSPRSPVGPASGGGGGYLNSMHSLVNSVPYESQSPTSYNKPHQNAYGMATSYPPPLNSSL
NNCPPSQKRYPGTDSATPEYDTHPLQGNGNYGTHMQGSPVYVGGGYIDSMPNSGASVFGL
THLSHPPSANMDYNGAITMGNSQHHGVCDPTPTYTDLTSHYSQGRIQEAPKLTHL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaggcaacctactacgacagctccgcaatttacagtggctacccatatcaaagc
gcaaatggcttcagttatgatgccaatcaggtccaatatccccgggcctctcatgtggaa
agtgagtaccatcgacctgcctgttccctgcagtctcctgacggctccgtggctctgcag
aagccgggggagatggcggagagctgcgacaggaccacagccattcaggcggcgcagtcc
aaggttcatcccgaaagcaatcaaccgcaggtgccggtgtcaggcccaccccctccctca
caatcccccggtgctatcagccaaaatacaagcaacgggtccaaccaacccagcgccaag
aacggctccccgacctcctctactcacggcaaacagatcttcccctggatgaaggaaagc
cgtcagaacaccaagcagaaaccaaccagtagctccagttcagtggagagttgtcccgga
gacaagagtcctccggggtcagcagcatcgaagagggcccggacagcttacaccagcgcc
cagctagtggagctggagaaggagttccactttaaccggtacctctgcagaccccgaagg
gtggagatggccaacctgctcaacctcaccgagagacagatcaaaatctggttccagaac
cgtaggatgaaatacaagaaggatcaaaaaggcgtcggaatgatgccttcccctggtgga
cagtcccctcggagtccagttggtccggcctccggtggcggtggaggatacctcaactct
atgcattctcttgtaaacagtgtaccttatgaatcccagtcgccaacgtcttacaataaa
cctcatcaaaatgcatacggtatggccacgtcatacccccctcctttaaacagctcgctc
aacaactgcccgccctcccagaagaggtatcctgggaccgactcggccacgcccgagtat
gacacgcatcctctccaaggcaatggcaactacgggacgcacatgcagggcagccccgtt
tatgttggcggaggttacatcgactcaatgcccaattctggggcctcagttttcggtctg
acccacctctcgcacccgccgtccgcaaacatggactacaatggagcaatcacaatgggc
aacagtcagcatcacggagtgtgtgatccgacaccgacgtacacagacctaacgtcgcac
tactctcagggaagaatccaggaagcgcctaaactgacgcatctgtag
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