Scomber japonicus (chub mackerel): 128374240
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Entry
128374240 CDS
T09718
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128374240 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sjo01007
]
128374240 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjo03016
]
128374240 (vars2)
Enzymes [BR:
sjo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
128374240 (vars2)
Amino acid related enzymes [BR:
sjo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
128374240 (vars2)
Transfer RNA biogenesis [BR:
sjo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128374240 (vars2)
Prokaryotic type
128374240 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
tRNA-synt_1e
SR-25
HrpB7
NDUF_B8
PDV_N
CCDC-167
Motif
Other DBs
NCBI-GeneID:
128374240
NCBI-ProteinID:
XP_053190492
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All DBs
Position
15:29734815..29763343
Genome browser
AA seq
1098 aa
AA seq
DB search
MSQHGLLRMWRACRVLSGRLPGRLYSSNPPKPSSSSSSSSSSSSSSSLSNSPLRPQAEKH
RRRKERERAILSGQHNPTEDDSVRWSEKQRIEYTAQTPAGTKKDTSLPFPSSYSPEYVEP
SWYQWWEKEGMFSPEQHETLSHAVDRTFSLCIPPPNVTGTLHLGHALTVAVEDALVRWRR
MQGHRVLWVPGCDHAGIATQTVVERMLLRDKGKRRQDFTREEFLQEVWKWKNEKGGEIYH
QLRRLGASLDWSRACFTMDPGFSRAVTEAFVRLCDSGLIYRSEGMVNWSCALESAISDIE
VDSKELCGPTMLSVPGYEQQVEFGTMLTFAYPLEGSNGEVSVSTTRPETMLGDVAVAVHP
DDPRYQAVHGKQCLHPFTNRLLPIITDTMVDMDLGTGAVKVTPAHDHSDFLLSQRHSLPR
LTVIGEDGMMTPLCGHWLEGVKRFDARQLVTDALAERKLLRGKKNHAMTLPICSRSGDII
EPLLKKQWFIHCQEMAKKAVQAVEEGQLEIIPHFYTKTWKNWLSNISDWCISRQLWWGHQ
IPAYRVELPNSTDKQEEHWVWGRSEDEARQRAAVKYGMKPEDISLTQDSDVLDTWFSSGL
FPFAMLGWPQQTIDLQRFYPNNILETGSDLIFFWVARMVMLGTELTGQLPFKQVLLHSLV
RDKHGRKMSKSLGNVIDPLDVIHGVSLERLQEKVKEGNLDPREQMVAMEAQRKDFPMGIP
QCGTDALRFALCSHKIQGEDISLSISQVLSCRHFCNKMWQTLRFTLGVLGDSSAAVGALE
ETAPLSSMERWVCSRLYSTVKQCEQSFEAYELHTVTSALYSFWVHSLCDVYLECVKPVLV
QQDDTEHSSRGRQVASSSSSSSSSVLYHCVSVSLALLSPFMPFLTEELWQRLQPFRPGAA
AAPIMSLCLQPYPCSSQLAHWHFPEEERDFLLVQEVIRVARSLRAQCGMTKEKPAMWAVC
SPSQAQILLHFGSAVWTLSRISSLHIYCPQAGEGVLSVPSTPPPEGSLVGVVDHTCQLHL
HVQNGMRVDKQITQLTQRRVKLLPKLEEILSRMQSPHYTSKVPAEVRQQMDRKMSALQQE
LKNIEDQLKLLQETQTTE
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcatggcttattaaggatgtggagggcatgtcgtgtcctgagtgggaggttg
ccagggagactctactccagcaaccctccaaaaccttcatcctcctcctcctcctcttcc
tcctcctcatcatcatcatcgctgtcaaactctcctctgcggcctcaggcagagaaacac
aggcggagaaaagagagagaaagggccatactgtcaggtcaacacaatcccactgaagat
gacagtgtgagatggagcgagaaacagaggatagagtatactgctcaaacaccagctggg
acaaagaaagacaccagcctgccgttcccatcctcatacagcccagagtatgtagagccc
agctggtatcagtggtgggagaaggagggaatgttcagccctgaacagcatgagacgtta
tcgcacgctgtggatcggaccttttcactgtgtatccctccaccaaatgtgactggtact
ctgcacctgggccacgctcttactgtagctgtagaagatgctctggttcgatggagaagg
atgcagggccacagagtgctgtgggttcctggatgtgaccatgcaggtatcgccacacag
acggtggtggagaggatgctgctgagggacaaagggaagcgcagacaggatttcaccaga
gaagagtttctacaggaggtgtggaaatggaagaacgagaagggaggagagatctatcac
cagctgaggaggctgggagcttctctggactggagcagagcctgtttcaccatggatcca
ggtttcagcagggctgtaactgaggcgtttgtcaggctgtgtgactcaggtctaatctat
cgttcagagggaatggtcaactggagctgtgctctggaatctgccatctctgacattgag
gttgactcaaaagagctgtgtggaccaaccatgttgtctgttcctggttatgaacagcag
gtggagtttggaacaatgctcacctttgcataccctttagaaggcagcaatggagaggtg
tccgtgtccaccactcgtcctgagactatgctgggagatgtagctgtagctgttcaccct
gacgaccctcgataccaggctgttcatgggaagcagtgccttcaccccttcactaacaga
ctgctgcccatcatcactgatacaatggtggacatggacctaggaacaggtgcagtgaag
gtgactcctgctcatgatcactctgactttctgctgtcacagagacactcactgccacgt
ctcactgtgattggagaagatgggatgatgactccactctgtggacactggctggaggga
gtgaagcgttttgatgccagacagttggtcacagacgccctggctgagaggaagctgctc
agaggaaagaagaatcacgccatgactttacccatctgcagccgctcaggtgatatcatc
gagcctcttctaaagaagcagtggttcatccactgtcaggaaatggctaaaaaagctgta
caggctgtggaggaaggacagctggaaatcatccctcacttttacaccaagacatggaag
aactggctgtccaacatcagtgattggtgtatttccaggcagctttggtggggtcatcag
atccctgcttacagagtggagcttcccaattccactgacaaacaagaggagcactgggtt
tggggaaggagcgaggatgaggcccgacagagagctgctgtcaaatatggaatgaagcca
gaggacatcagtctgactcaggactctgatgttctggatacatggttctcctctgggttg
tttccatttgccatgctgggctggcctcagcagaccatagacctccagcgcttctacccc
aacaacatcctagaaacaggaagtgacctaatcttcttctgggtggcgaggatggtgatg
ctgggtacagagctgactggccagctgccatttaaacaggttctgcttcactctttggtg
agagataaacacggcaggaaaatgagtaaatctctgggaaacgtcattgatcctttagat
gttatacacggagtctctttggagagacttcaagagaaagtgaaggagggaaacctcgac
cctagggagcagatggttgccatggaagcacagaggaaagacttccccatggggatccct
cagtgtgggactgacgctctgagatttgccctttgctctcacaagatacagggagaagac
atcagtctgtccatctctcaggtcctgagctgcagacacttctgtaataaaatgtggcag
acactgaggttcacactgggagtgctgggtgacagctcagcagcagtgggagcactggag
gagacggctcctctgagcagcatggagcgctgggtgtgctccagactctacagcacagtg
aaacagtgtgagcagagctttgaagcctacgagctgcacactgtcacatctgccctgtac
tccttctgggtccacagcctgtgtgatgtttacttggagtgtgtgaagcctgtgctggtg
cagcaggatgacacagagcacagtagcagaggcaggcaggtagccagcagcagcagcagc
agcagcagcagtgttctctatcactgtgtgtctgtgtctctggctcttctctcccccttc
atgcccttcctcactgaggagctgtggcagagactccagccattcagacctggagctgct
gcagccccaataatgagcctgtgtctccagccgtacccctgctcctctcaactggcacac
tggcatttccctgaagaggaaagggatttcttactggtccaggaagtgatccgtgtggcc
cgctctctgagagctcagtgtggtatgaccaaagaaaaacctgccatgtgggcggtgtgt
tcacccagccaggctcagatcctccttcactttggctctgcagtttggactttaagtcga
atctccagcctccatatctactgtcctcaggcaggagaaggtgtcctctctgtcccctcc
actcctccacctgaaggaagccttgttggtgtggtggaccacacatgtcagctgcacctt
catgttcagaatggaatgagagttgacaaacagatcactcagctcactcagcgcagagtc
aagcttcttcccaaactggaggagatcctcagcagaatgcagtcaccacactacacgagc
aaggtgccagctgaggtcaggcagcagatggacaggaagatgtcagccttgcagcaggaa
ctgaagaacattgaggatcagctgaagttgctgcaagagacacaaacaacagagtaa
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