Scomber japonicus (chub mackerel): 128374277
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Entry
128374277 CDS
T09718
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128374277
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
128374277
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GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_5
ig
Ig_2
V-set
LRRNT
Motif
Other DBs
NCBI-GeneID:
128374277
NCBI-ProteinID:
XP_053190532
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All DBs
Position
15:13944869..13946689
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AA seq
606 aa
AA seq
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MFVGIAVHQRLCWGALYLLAAGLALTSETRRLCPHSCRCNTTVLELNCSYGQLTTVPDGL
PQDTKLLNLTHNIIKTLVHEQFQTLTHLLDLDLSDNFLAIIEVEAFLGLHSLLTLRLAHN
HLKIIPVGAFAGLSKLQLLDISDNKILVVLDFTFHDLASLQFIKAEENDLVFISHQAFTG
LTSLQELHLDACNLTAVPTEALTQLSGLRSFYFHRLGLNSLPNYSFRHLVRLKELFISHC
PWLETLSGNSLFGLNLTSLTITHCNLSTVPYIPLHHLVYLVYLDLSFNPITYIHAMLGDL
LRLQEFHLVGGSLLRIELGAFRGLARFRLLNVSRNLLTTLEKRVFHSLDTLESLGLDNNP
LACDCRLLWVVRKRLYLDFGGYPPTCTTSVQLQGWNFLDFSEAELPGLLTCRQPRILNHK
PQEVKVDQGHTVVFYCNVEGDPQPSVTWLNPQLRPLSPIGRIRALSNGSLEVRYAQPQDS
GTYLCVASNAAGNDSLPVSLHVRCFPSSSKNPFRLKSWFAFPSASPGVNGPQKLPFDFKT
LLVAATIGFASFFSSVSICFIFMFFWSKSKGRIKHTATIAYVPRSAASGSAGGTGNETSR
FTMKLI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggggattgctgtccatcaaaggctgtgctggggagctctgtacctgttggcg
gcagggctggcattaacatctgaaacacgccggctgtgtcctcactcctgtcgctgcaac
accacggtgctggagctgaactgctcttatggccaacttaccacggtgcctgacggtctc
ccacaagacactaaactcctgaacttaactcataatataataaagactctggtgcatgag
cagtttcagactttaacacatctcttggacttggatttaagtgacaacttcctggcaata
atcgaagtggaagcttttcttggcttgcatagtctgctaactctgcgtcttgctcacaat
cacctgaagataattcctgtaggagcctttgctggtttgtcaaaactgcagttactggac
ataagtgacaacaagatccttgttgtcttagatttcactttccatgatttagcgtccctg
cagtttattaaggcagaagaaaatgacttagttttcatctctcatcaagctttcactggc
ctaaccagcctacaggagctgcaccttgatgcctgcaatctcactgctgtgccgacagag
gcgctcacacaacttagtgggctgagaagcttttattttcaccggcttggcctcaactca
ctaccaaactactctttccgtcatctagtgcgtctaaaggaacttttcatatctcattgt
ccctggctagagaccctgtcgggaaatagtctctttggcctaaatcttacatccctcacc
atcacacactgcaatcttagtactgttccctatatccctttgcatcatcttgtatatctt
gtttaccttgacttgtcttttaatccaatcacctacattcatgcgatgctcggtgacttg
ctgcgtctccaagagtttcatctggttggaggatcgttactgcgtattgaacttggagca
ttcaggggtctggcacgcttcagattgctaaatgtgtctagaaatcttctaaccacactc
gagaagagagtttttcattcattggacacccttgaaagtctgggacttgacaacaatcca
cttgcatgcgactgtcgattgctatgggtggtgcgcaagcgcctctatctggattttggt
ggatatccaccaacttgcactacctctgtccagttgcagggctggaattttctggacttc
tctgaagctgagctcccaggtttgctcacctgtcggcagcctcgaattctgaaccacaaa
cctcaagaagtgaaagtggaccagggacacacggtggtgttttactgcaacgtggaaggt
gaccctcagccatctgtcacttggctaaacccacagctaagaccgttatcacccattgga
agaatacgagctctgtccaatggctcactggaggtccgctatgcacagcctcaagacagt
ggtacttacctgtgtgtggcatctaatgcagcaggaaatgacagtctgcctgtcagcctc
catgtccgatgctttccatcatcttctaaaaacccctttcgtcttaagagttggtttgcc
tttccgtctgcctctcctggtgtgaatggacctcagaaactcccatttgatttcaagacg
ttactggtagcagcaactattgggtttgcttcatttttcagctctgtgagcatatgtttc
attttcatgttcttctggagtaagagcaaagggcgaataaaacacacggccacaattgct
tatgtgccacgaagcgctgcgtcaggtagtgctggaggcacaggtaatgagaccagcagg
ttcaccatgaaactaatatga
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