Scomber japonicus (chub mackerel): 128374423
Help
Entry
128374423 CDS
T09718
Symbol
tap2a
Name
(RefSeq) antigen peptide transporter 2a
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo02010
ABC transporters
sjo04145
Phagosome
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128374423 (tap2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128374423 (tap2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128374423 (tap2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128374423 (tap2a)
Enzymes [BR:
sjo01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
128374423 (tap2a)
Transporters [BR:
sjo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
128374423 (tap2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
RsgA_GTPase
AAA_29
AAA_30
Nrap_D2
Rad17
Motif
Other DBs
NCBI-GeneID:
128374423
NCBI-ProteinID:
XP_053190661
LinkDB
All DBs
Position
15:complement(6653825..6661195)
Genome browser
AA seq
719 aa
AA seq
DB search
MADNTATIFRKVVALTSAVFVDLSLFYASGFVATYGVFGHLSRLWVSAGLRFLALTAVTL
FTLGDFKPVLIRFITAHSVLPAVFETGISVLYHEESQCGLLSDARCWLMCTGASLAAALF
WELTIPDSDDEAAGKEKKQKSRVLFMRVLWLYKPYYLMLFGGFVFLSLAVICEMFIPFYT
GRVIDILGSNYQPNEFLSALLFMGLYSLGSSMSAGCRGGVLLCAISAFTCRMKVKLFEAL
TKQEIGFFETIKTGEITSRLSRDTNLMGRTVCLNVNVLLRTFIKTLGMISLMMNLSWKLT
FLVLMETPITGLIQNIYDTHYQRLSLAVQDSMAQTNDSASEVVSGIRVVRSFNTEKHEAR
RYDNHLMETHTLKTRRDAVTAVYLLARRLTGLGMQVFILYYGRLFIRRGQMTTGNLVSFI
LYQSDLGDNIRTLTYIFGDMLNSVGAAGKVFELLDRKPQVNTEGKLTPDQLKGHVSFRHL
TFAYPSCPQKTVLKDFSLELKPGQMTALVGPSGEGKSTCVSLLERYYEPQDGEILFDNEP
LKSYEHRFLHRKIAVVSQEPVLFSGSIRHNIAYGLDECSMEEIQEAARKANAHDFIQQLE
KGYDTEVGESGSQLSKSERQRIAIARALVRQPQVLILDEITSSLDAECENKVQQSLASCP
NQTLLVIAHRLKTIEKADQIVVVGDGRVQERGTHQELMDMKGSYYKLREKLFTEGNSPQ
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatacagcaacaatatttcgtaaagtcgtcgctttgacttcagcagtcttc
gtcgacctctctttgttttacgcatcaggatttgtagccacatatggcgtcttcggtcat
ctttcgcgtttatgggtctctgcgggtctccggttcttggctctaactgctgtaactctg
ttcactcttggagacttcaaaccggtcctgattcgttttataacggcgcacagtgtgctg
cccgcggtgtttgagaccgggatctcggtgctctaccatgaggagagtcagtgcggcttg
ttatctgatgcgcgctgctggctgatgtgcaccggtgcgtcgctggctgctgcgctgttt
tgggagctcaccatcccggacagcgacgatgaggcggccggtaaagagaagaagcagaag
tccagggtgcttttcatgagagtcctctggctgtacaaaccctactatttgatgctgttt
ggagggtttgtgttcctttcgctggctgttatctgtgagatgtttatacccttctacacc
gggagagtcatcgacatccttggcagtaattaccagccaaatgaattcctgtctgcactc
ctcttcatgggcctgtactctctgggaagctccatgagtgcaggctgcagagggggtgtt
ttactttgtgccatcagtgccttcacatgcagaatgaaagtcaagctgtttgaggctttg
accaaacaggaaattggattctttgagaccataaagacaggtgaaatcacatccaggttg
tctagagacaccaacctgatggggagaacagtgtgcctgaacgtcaacgtgctgctgagg
acattcatcaagacgctgggcatgatttctctgatgatgaacctttcatggaagctcaca
ttcctcgtgttgatggagacgcccattactggcctcatacaaaacatctatgacacacac
taccagcggttgtccctggcagtgcaagactcaatggctcagacaaatgactcagcaagt
gaggtagtatctggtattcgtgtggtacggagctttaatacagaaaaacatgaagcccga
cgctatgacaaccatttgatggaaacacataccctcaaaacccgccgtgacgctgttaca
gctgtttacctgctcgcaaggaggttgacaggtttgggcatgcaggtcttcatattgtac
tatggcaggctgttcatccgcagaggacaaatgaccactggcaacctggtttccttcatc
ctctatcagtcagaccttggagacaatatcaggactctcacctacatctttggtgacatg
ctgaactcagtgggggctgctggcaaagtgtttgagttactggatcgaaagcctcaggtc
aacacggagggaaaactcacacctgatcagctgaaaggacatgtcagcttccgccatctt
acctttgcctacccttcatgcccccaaaagacagtgctgaaggacttttctttggagctg
aagccaggtcagatgacagctctggtgggtccatctggagaaggaaaaagcacctgtgtg
agtctcctggagcgatactacgagccacaggatggagaaatcctatttgacaatgagccg
ctgaaatcctatgaacaccgtttcctccacaggaagatcgctgtggtgagccaggagcct
gtgcttttctctggctctatcagacataacatcgcctacgggcttgatgaatgctcaatg
gaagagatccaggaagcagcacgcaaagccaacgcccacgactttattcagcaactggag
aaaggctatgatacggaggtgggtgaaagtggcagccagttgtccaagagtgagcggcag
cggatcgccatcgctcgagctctggtcagacagccacaggtcctcattctggatgaaatt
accagctctctggacgctgagtgtgaaaataaggttcagcagtccctggctagctgtccc
aaccagacgctgctggtgatcgcccatcggctgaagaccattgagaaggcagatcagatt
gttgtggtcggtgacggcagagttcaggagcgagggactcaccaggagttgatggacatg
aaggggagctactacaaactgagagagaagctcttcactgagggaaactcgccacagtga
DBGET
integrated database retrieval system
