Scomber japonicus (chub mackerel): 128374426
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Entry
128374426 CDS
T09718
Symbol
tapbp.1
Name
(RefSeq) TAP binding protein (tapasin), tandem duplicate 1
KO
K08058
TAP binding protein (tapasin)
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128374426 (tapbp.1)
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
I-set
C1-set
Ig_2
KOW6_SPT5
Motif
Other DBs
NCBI-GeneID:
128374426
NCBI-ProteinID:
XP_053190666
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Position
15:6758711..6764785
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AA seq
442 aa
AA seq
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MTDFSTIYKLSLVAVACFLQACSSSCPVMDCWFVQEKAGRGGGLTAPTTQEKSLLYIRTE
AHSESPKTQQAPPDISPDRVYFVTDPDATLCHRSLNPPKGSIKKPQCEINPFQPQISSLK
WAAPLTESALSPIYLQADWISTAIQGLNKQLGVSSIMRAPTGSKEHDVVLSVTTKTVSVQ
SRLGEPVLLDCGFWTDPTSPLYGSGFAVEWRYQFRGDGRLVLAYDGKADRLADTQEGGAT
LDFDSLHEKGNASLILQEAQVRHSGTYICTVYLPYLLAQVAVELEIVEPPSLSIHPSPLP
LSVPGQILTVQCDASGFAPLTLELSWEFKDTDGKSRPLGSGSVTGHRQAWDGTFSQSSRL
ELDTSKLDLSRGGEVTCVAVHPGGTRRASVTLNVIGFSTPSIEDSMAMVGVALVLYGLIK
FVSWTFTSSGSDEANKNDKKEK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacggacttctctacaatttacaaactatctctggttgctgttgcctgcttcctccaa
gcttgcagcagcagctgtcccgtgatggactgctggtttgtgcaggagaaagcaggtcga
ggaggaggtctaactgcacccacgactcaggagaaatccctgctttacatcaggacagag
gctcacagtgagagtcccaaaacccagcaggctccacccgacatcagccctgacagagtc
tacttcgtcaccgacccagatgccactctctgccatcgttctctcaaccctcccaaaggc
tccatcaagaagccccagtgtgaaatcaaccccttccagccgcagatctccagcctcaaa
tgggctgctccactcacagagtccgccctcagccccatatacctgcaagctgactggatt
tcaacagccattcaggggctcaacaaacagctaggtgtttccagcatcatgcgtgcaccc
acgggatccaaagagcatgacgtcgtcctgagtgtgaccactaaaacagtctcagtgcag
tccagacttggggaaccagttctgctggactgcggcttctggacagaccccacctcacct
ttgtatgggtctggtttcgctgtcgagtggcgctatcagttcagaggcgatggacggctg
gttctggcttacgatggcaaggcagatcgcttggctgatacacaagagggaggcgcaacg
ctggactttgacagtttgcatgagaagggaaacgcatccctgatcctgcaggaggctcaa
gtgcgtcactctgggacgtatatctgcacggtgtatcttccataccttttggctcaggtg
gcggtggagcttgagattgtagaacctccatccctctccatccacccctcccctctgccc
ctttctgttcccggccagattttgaccgtccagtgtgacgcgtccggcttcgcccctctc
accctggagctgagctgggagttcaaagacactgatggcaagtccagacctctgggatca
ggcagcgtaacgggccacaggcaggcctgggacggcacctttagccagagcagccgactg
gagcttgacacgtccaagctggacctgagcagagggggagaagtcacctgtgtggccgtc
catcctggaggcacacgacgagccagcgtgaccctcaatgtcattgggttcagcactccg
tccattgaggactcgatggcaatggttggtgtggcgctggtgctgtacggtcttattaag
tttgtctcttggaccttcaccagctcaggttcagatgaggctaataaaaatgacaagaaa
gagaagtaa
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