Scomber japonicus (chub mackerel): 128374450
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Entry
128374450 CDS
T09718
Symbol
tra2a
Name
(RefSeq) transformer-2 protein homolog alpha isoform X1
KO
K12897
transformer-2 protein
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128374450 (tra2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128374450 (tra2a)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128374450 (tra2a)
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128374450 (tra2a)
Spliceosome [BR:
sjo03041
]
Common components
Common spliceosomal components
SR proteins
128374450 (tra2a)
BRITE hierarchy
Motif
Pfam:
RRM_1
FMP27-BLTP2_C
RRM_3
GRP
Motif
Other DBs
NCBI-GeneID:
128374450
NCBI-ProteinID:
XP_053190697
LinkDB
All DBs
Position
15:19625403..19631199
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AA seq
308 aa
AA seq
DB search
MSDIEDGNYEGRGSRSPSKSDRGSPARVKSESRSGSPSPSRASKRSESRSHSRSKSRSRS
RRHSNRRGSRSRSRSYSHRRKSRSRSYSPEYRRRKSQSTSPMSNRRRHTGSRSNDFTKEA
CNDADVRANPDPSTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQRTGRSRGFAFV
YFERIEDSKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGRPTHNGGGGGGGGGG
GGSSSGGGGGGGGGGSRRGRDSYYDRGYDRYDRYDEYDYRYSRKRSPSPYYSRYRSRSRS
RSYSPRRY
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacattgaggatggaaactatgaaggacgggggtcacgctccccatctaaatcg
gatcgcgggagtccagctcgggtcaagtcggagagcaggtccggctccccgagcccatcc
cgagcctccaaacgctctgagtctcgatcccactctcggtcaaaatcaaggtctcgttca
aggcggcactcaaaccggcgcggtagccgctcacgttctcggtcctattcccaccgaagg
aagtcccgctctcgttcttacagtcctgaataccggcgcaggaagagccagagcacctcc
ccaatgtccaaccgccgccgtcacactggcagtaggagcaatgacttcacaaaagaagca
tgcaatgatgctgatgtaagggcgaaccctgaccccagcacgtgtttgggggtgtttggt
ttgagcctgtacaccacagagcgtgacctgagggaggtgttttcacgctatggtccactt
gccggggtcaatgtggtgtacgaccagcgcacaggtcgctcccggggctttgccttcgtt
tactttgagagaattgaggattccaaagaggcaatggagcgagccaacggcatggagctg
gacgggaggcgcatcagagtggattattccattaccaaacgtccccatacccccacacca
ggaatctacatgggccgaccaactcacaatggtggtggcggcggcggcggcggcggcggt
ggtggcagcagcagtggtggtggcggtggtggtggcggcggcggcagcaggagggggaga
gactcctattatgaccgtggctatgaccgttacgacagatatgacgagtatgactatagg
tatagtcgcaaacgctctccatcaccctactacagtcgatacaggtctcgctcacggtct
cgctcctacagcccacggcgatactaa
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integrated database retrieval system
