Scomber japonicus (chub mackerel): 128374491
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Entry
128374491 CDS
T09718
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128374491 (vps50)
Membrane trafficking [BR:
sjo04131
]
Protein recycling
Others
EARP complex
128374491 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
128374491
NCBI-ProteinID:
XP_053190735
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All DBs
Position
15:18993106..19101105
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AA seq
967 aa
AA seq
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MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELREMREQPIDPQAEQEIIDSIEEV
YFSNDSFDMVQHELEKLPPELNLQELEEYRDKLKKQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSVSKEGFTEASLGLLANQRRRQLLTSLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVAHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDKLETTPTPDG
AAAAESDELVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQCRSPSVSPSRQAVSSTSHAQEELSLFQQYLQEGNPFEMHIENKEEETED
VLASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDAPLKSVSRETMRSKKKSDY
NLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMYESSGLGLISSRLRTTLNRIQESLIDMEAVGENAGVHGPSEDKKEKVPSPHLSQLVVL
TNSGTLYGLAQRVVATESLVFLAEQFESLQSHLDTMMPAAKKPFLQQFYSQTVSTASELR
KPIYWIVAAKAIDYEQMLLMMAGVKWDIREIMSQHNVYVDVLLKEFEQFNKRLGDVSRHV
RIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPI
PDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctctgatggcccggcagggtctgaaaagcccccaagagagcatg
gcagacctcagtcctgtggagaacctgaggatcccgagcaaggaggagctgcgggagatg
agggagcagcccattgaccctcaggcggagcaggagattatcgacagcatcgaggaagtc
tacttctccaacgactccttcgacatggtgcagcatgaactggagaaactcccacctgag
ctgaacctgcaggagctggaggagtacagagacaagctgaagaaacagcaggcagctgtt
tctaaaaaggtcgccgatctcattctggagaaacagcctgcttatgtcaaggaactggag
agagtgacggcgttgcagacaaacctgcagctggcagctgtcatttgcactaatgcgagg
aggcaactgagcgtgtcaaaggaaggattcacagaggccagcctgggcctattggccaat
cagagaagacgacaattgctgacaagcctgctcaagtcgctgaggaccatcaagacgctg
caaagaacagatgtaagactgagcgagatgcttgaggaggaagactatccaggtgctatc
cagctctgtctggaatgccagaaggctgccagtaccttcaaacactacagctgcatcagc
gaattgaattccaaactacaagacactttggagcaaatagaggagcagcttgatgtcgcc
ctgtcgaagacttgcaagcactttgatgttgcgcactacaccaaggtccagctggcctat
acactcctgggcaagacacagaccgccatggaccagctacacatgcacttcacccaggcc
atccacaacactgtgttccaagtggtgttgggatatgtggagttgtgtgccggcaacgct
gataccaagttccagaaaatgcagtacaaggacctgtgcacgcatatcaccccagacagc
tacattccctgcctgacagacctatgcaaggcattgtgggaggtgatgctgagctaccac
cgcaccatgcagtggcacgaagagcatgacaaattggagaccacacccaccccagatggt
gcggcagcagcagaatctgacgagttggtggtggaccgcagctatgtgaagaagaagctg
gagcatggactgacccggatctggcaggatgtccagttgaaagtgaaggcctacatcctg
gggacagacatgtctaacttcaagtacgacgatttcatagtggtgctggatgtcatcagc
aggttgatgcaggtgggcgaggagttctgtggcagtaagtcggaggtcctgcaagagtct
atcaaacgccagagtgtcaattactttaagaactatcacagggcacgactggaagagctg
agaatgtttctggaaaatgagacgtgggaactttgtccagtcaagtccaactttaacatc
gctcagctccatgagtttaagttcatggggcagtgccgctccccgtctgtttccccgagc
agacaggctgtgtcgtccaccagccatgcccaggaggagctgtctctcttccagcagtat
cttcaggagggaaacccctttgagatgcacatcgagaacaaagaggaggagacggaggat
gtgctcgcatctaacgggtatgaatccgatgagctggagaagagcgtgtaccaggattac
gacagtgacagtgatgtccccgaagagctcaagcaggactatgtggatgaacagacgggt
gatgcccccctcaagagtgtatcccgagagactatgagaagcaagaaaaagtcagactac
aaccttaataagaccaatgcaccaatcctcaccaacaccaccctgaacgtcatccgactt
gttgggaagtacatgcagatgatgaatattctgaagccgatcgcctttgatgtcatccac
tgtgtgtcccagctctttgactactacctgtatgctgtatacaccttctttggacgcaat
gacatgtatgagtcatcgggtctgggccttatcagcagcagactgagaaccacactgaac
cggatccaggagagccttattgacatggaggcagtgggggaaaatgcaggagtgcatggc
ccctcagaggacaagaaggagaaagttcccagcccccatctgagccaactagtggtcctt
actaacagtgggactctttatgggctggcacagagagtggtggccaccgagtctcttgtg
tttttggccgaacaatttgagtcccttcaatcccacctggacacaatgatgcctgcagcc
aagaagcccttcctgcaacagttttattcccagacggtgtccacagccagtgaactgcgg
aaaccaatatactggattgtggcagccaaggccattgactatgaacaaatgttgctgatg
atggctggagttaaatgggacattagggagataatgtcacagcacaatgtatatgtggac
gtcctgttaaaggaattcgagcagtttaacaagcgtcttggtgatgtttccagacatgtg
cgcatcccactgcccgtgtctaacgtcttgtgggagcactgcattcgcttggccaacagg
actcttgtagagggctatgctaatgtgaagaaatgcagcaatgagggccgggccctgatg
cagctggactttcaacagttcctgatgaagctggagaagctgaccgacctgcggccaatc
cccgataaggagtttgttgagacctacatcaaggcctactacctgaccgagaacgacatg
gagcagttcatcaagaatcacagggagtactccatgaagcagctagccaacttggtgaac
gtttgcctgggttcacatataaacaagaaggcccgccagaaacttctggcagccattgat
gacattgacagacccaagagatag
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