KEGG   Scomber japonicus (chub mackerel): 128374515
Entry
128374515         CDS       T09718                                 
Name
(RefSeq) toll-like receptor 13
  KO
K18808  toll-like receptor 13
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:sjo04054]
    128374515
Pattern recognition receptors [BR:sjo04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   128374515
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_9 LRR_5 LRR_NXF1-5 LRR_6 LRRNT IFT52_central
Other DBs
NCBI-GeneID: 128374515
NCBI-ProteinID: XP_053190759
LinkDB
Position
15:796109..801079
AA seq 1037 aa
MNFLLALQHGESSYMNFLLALQHGEKRSRPADETVSRNLSALGVRVRTRGSGQDSGQDSG
FGSGLGVRVSPRGSGQDSGQDSGFGSGLGVGVRTRGSGQDSGFGSGLGVRVRTRGWGQDS
GFGSGLGVRVRTRGSGQDSGFGSGLGVRIIMPRSCFLFLLLLRFNPSLTYSLKNCTVEYS
ADVSHVSVLCMDRELTAVPDDIPKTAQSLILSTNQILSINQTDLRGLSKLVFFLMQLNSL
SHVADGAFADLVELTELDLSCNDLTDLTDDMFQGLTKLLSLSLNRNQIAYISPLAFQPLI
NLQKVDLADNELRVITYIVPILQLSSLNELHIGTNRFTTFESDDLHLNISNLRRLEFNLN
PLEKFSITKDVFPHLEYVDLSKCSVGFEWNVPDKTFLRSLTSLLLSGTEISFETYSSMLR
SAESVEYLWLSYTTEWFDKGLIDVACQIPALTNLDLTCNDIHILNDTLLQPCSKITQLAL
VGNVMTHLSEDSLRPLTQLVELRLHQNFLPEVPFAVRGLSSLAVLTLSYNDIGELGCSDF
LNLTSLMQIFLNNNRISRLRGCVFQELKNLRLLYIEDNPIYSLDDTFKVSLKSLRILNMH
SNDLKGLSKGVFENLSFLLNLDLKSRSICHEENGTFEGLDHLQTLVLTAYSLTTDMFRGL
PHLENLTITLPIFLNSLSHQLPKEPPFLNVPSLRELAIQNMNKYNMVITPDLLRGLNSLE
NFAAVNFFAGPPHPDTFTYTPHLISLQITDSNVSYPEPEMVRPIPNLQSLDLSKNKLRSL
DFLAQADLPVLSWLKLSENELTVINETVFQSLPALTYLDLLGNPFTCSCSNVGFIQWMIS
NNQTQVVNAYQYTCSFPPSKQGSKLLDFDIQSCWMDVNFLCFISSTCLVVLTLLTSFIYH
FLRWQLTYGFYLFLAFLYDKRKRKQEAPHCYDAFISYNVHDEAWVYQEMLPVLEGEQGWR
LCLHHRDFQPDSFTSLFDDQQCLQVLMLSAVKCDRSHRHLQVQRDKLCPDSWLDDFKVLK
TLPIKTSEAPTPSTQIT
NT seq 3114 nt   +upstreamnt  +downstreamnt
atgaacttcctgttagcgctgcagcatggagagagctcatacatgaacttcctgttagcg
ctgcagcatggagagaaaagaagcagaccggctgatgagacggtaagtagaaacctctca
gccctcggggttcgggtcaggactcggggttcgggtcaggactcgggtcaggactcgggg
ttcgggtcaggactcggggttcgggtcagccctcggggttcgggtcaggactcgggtcag
gactcggggttcgggtcaggactcggggttggggtcaggactcggggttcgggtcaggac
tcggggttcgggtcaggactcggggttcgggtcaggactcggggttggggtcaggactcg
gggttcgggtcaggactcggggttcgggtcaggactcggggttcgggtcaggactcgggg
ttcgggtcaggactcggggttcggatcatcatgcctcgttcctgtttcctcttcctgttg
ctgcttcgttttaacccttcgctgacgtactctctgaagaactgcaccgtcgagtactct
gcagacgtcagccatgtttcggttttgtgcatggaccgagaactcaccgccgttcccgac
gacatccccaaaaccgcccagtcgctcatcctcagcaccaatcagatcctgagtatcaac
cagacggacctgagaggcttgtccaagctcgttttcttcctgatgcagttaaactctctg
tcacacgttgccgacggtgcttttgcagacttggtggagttaacggagctcgatttaagt
tgtaatgacctcacagacctcacagacgacatgtttcagggactcaccaaattactgagt
ctgtctttaaaccgtaatcaaatcgcgtacatctctccgctggcctttcagccgctgata
aacctacagaaagtagacctggctgataacgagctgcgtgtgatcacttacattgtgcct
attttgcagctgtcaagcttaaatgaattacacattgggacaaacaggttcactaccttc
gagtctgatgatctgcatttaaacatctccaacctgaggagactggagtttaatttgaat
ccactggaaaagttcagcatcacaaaagacgtctttcctcatctagagtacgtcgatttg
tccaaatgcagcgtcggctttgagtggaacgtacccgacaagacgtttctgaggagcttg
actagtttgttattaagtggaactgaaataagttttgagacgtacagctcgatgcttcgg
agcgctgagtcggtggagtatctgtggctcagctacaccactgaatggtttgataaaggt
ttgatagacgtcgcctgccagattcctgccttaactaatcttgatttgacttgtaatgac
attcacattttaaacgacacactgcttcagccttgctccaaaatcacccagctagcttta
gtcggtaacgtcatgacccacctttcggaggactcactcagacctttgactcagctcgtg
gaactacgtttacaccagaactttctaccagaagtgccgtttgccgtcagaggtctctcc
tcccttgcagtcttaactctgagttataatgatatcggagagctcggctgctccgacttc
ctgaacttaacgagtttgatgcagatcttcctcaataacaatcgcatctcaagactcaga
ggatgtgtttttcaagagttgaagaatttaagattactctacattgaagacaatccaatt
tacagtttggatgatactttcaaagtcagtctgaagagcttacgtattttaaatatgcac
agtaatgatttgaagggactcagtaaaggcgtctttgagaacctgtctttcctcctgaat
ttggacttaaagtcccggtcaatttgtcacgaggaaaacgggacttttgaaggactcgat
catctccaaacgcttgtccttacagcttactctctcacaacagacatgttcagaggactg
ccacacttagagaacctgacaataaccctccccatttttctcaacagcttgagtcatcaa
ttacctaaggagccccctttcttaaatgtaccatctttgagagagcttgcaatccaaaac
atgaataaatataacatggttatcacaccagacctgctcaggggcctgaactctttagag
aactttgcagcagtgaatttcttcgcagggccaccgcatccagacacatttacctacact
cctcacctgataagtcttcagataactgacagtaacgtctcatatccagaacctgaaatg
gttcggccgatcccaaacctgcagtccctcgatctgtccaagaacaaactcagatctttg
gattttctggctcaggccgacctgccggttctcagctggttgaaactcagtgagaacgag
ttgacggtgatcaatgagacggtcttccagtctctgcctgcactaacatatctggacctg
cttggtaaccctttcacctgtagctgctctaatgtcggcttcatccaatggatgattagc
aacaaccagacacaagttgttaacgcctaccagtacacttgttcctttcctcccagtaaa
caaggaagcaagctgctggactttgacatccagtcctgctggatggacgttaacttcctc
tgcttcatttccagcacttgtctggttgtgctaactctcctcacatccttcatctaccac
tttctgaggtggcagctaacctacggcttctacctcttcctggccttcctctatgacaag
aggaagaggaagcaggaagctcctcactgctacgacgccttcatctcctacaacgttcat
gacgaggcctgggtttaccaagagatgcttccagtgctggaaggagagcagggctggaga
ctctgtctgcaccacagagacttccaaccagacagtttcacttccctatttgatgaccag
cagtgtttacaggttctgatgctcagtgcagtgaaatgtgaccgatctcacagacatctc
caggtgcagagagataagctgtgccctgattcatggctggatgattttaaagtgttaaaa
actctgcccataaagacctcggaggcacctactccttctacccaaatcacatga

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