Scomber japonicus (chub mackerel): 128374589
Help
Entry
128374589 CDS
T09718
Name
(RefSeq) LOW QUALITY PROTEIN: protein MTSS 1-like
KO
K20128
metastasis suppressor protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128374589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128374589
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
I-BAR proteins
128374589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMD
WH2
T3SS_ExsE
Motif
Other DBs
NCBI-GeneID:
128374589
NCBI-ProteinID:
XP_053190808
LinkDB
All DBs
Position
15:complement(3089560..3131592)
Genome browser
AA seq
502 aa
AA seq
DB search
METGSYPVWDDFVSKASKLQSQLRTTVVAVAAFLDAFQKVADLATNSRVFLIGIFQVDSW
IDLMKQEVRSLNSVNSSDSRSSGSHCHSPTSHFRYRASSSSSSAMPQQTPARLSSVSSHD
SGFISQDAFQSKSPSPMPPETSQLSNGFDHHHAALYFPPLCSSGLGAVPSSRIPSWKDWA
KPGPYDQPMVNTLKRNKDRRETTDPSSXTTASMSPQQARSCKGSKEATRSDGEDRDAHEE
LARALARGLQLDIHGSSRDSLQGSSGYSSQTNTPCCSEDTIPSQVSDCDYYTVGVDQEAE
HQQSSDFDKSSTIPRNSDISQSYRRMFQSKRPASTAGLPSNPSAIITPGVATIRRTPSSK
PNLRRPSGGLNLGPIPIKPPMIPVKTPTVPDHPGFPSRAASEDGNTPRTPLSPATTPLSP
GSSGPLSSKSSLWESQHQAEGSDPPTPPPQPGGRVSEWERRPLPELLEETEYGEVEDFLV
AIRRGVRLKKAMTNDRSAPIIH
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgggtagttatcccgtctgggacgacttcgtgagcaaggccagcaaactacag
tcacagctcaggacgacggtggtggcggtcgcagctttcctcgatgcctttcagaaagtg
gccgacctggcgaccaacagcagagtcttcctgatcggcatcttccaggtcgactcctgg
atcgatttaatgaaacaggaagttcgcagtctgaacagtgtgaacagcagtgactctcgc
tccagcggctctcactgtcactctcccacctctcacttccgttaccgcgcctcctcttcg
tcgtcgtcggcgatgcctcagcagacgccggcccgcctctcctccgtctcctcacacgac
tccggcttcatctcccaggatgcatttcagtccaagtcaccttcacccatgcctccagaa
acatcacagttgtcaaatggtttcgaccatcatcacgctgccctctacttcccgcctctc
tgctcctcggggctcggagcggtcccgtcgtccagaatcccgtcctggaaggactgggcc
aaaccgggtccgtacgaccagccgatggtcaacaccctgaagaggaacaaggacaggaga
gagactacagatcccagcagcnncaccacggcatcgatgtcaccgcagcaggcgaggagc
tgcaagggatcaaaggaagccacaaggtcagatggggaggacagggacgcccatgaggag
ctggcccgagccctggcccgaggcctccagctggacatccatggctccagcagagactcg
ctgcagggctccagcggctacagcagccagaccaacacaccctgctgctcagaggacacc
atcccctcacaagtatcagactgtgattactacactgtgggagtggatcaggaggccgag
catcagcagtcatcagacttcgataaatcctccaccatcccgaggaacagcgacatcagt
cagtcgtaccgccgcatgttccagtccaaacgcccggcctccaccgccggcctgccctcc
aacccctccgccattatcacccctggagtcgccaccattagacggacaccgtcctccaaa
cccaatctgcggcgcccatctggaggccttaacttgggccccatccccatcaagcccccc
atgatcccagtcaagacccccacagtgcctgatcatcctggtttccccagtagggcggcg
tcagaagatggcaacacgcctcgaacccctctgagccccgcaaccacccctctgtcacca
ggcagcagcggcccgctgtcatcgaagtccagtctctgggagagccagcaccaggccgag
gggtcggatcctcccaccccaccgccgcagcccggtggtcgggtatcagagtgggagcgc
cggcctctcccagagcttctggaggagacagagtacggagaggtggaagactttctcgtg
gctatccgacgaggcgtcaggctcaagaaggcgatgaccaacgaccgatcggcaccaatt
attcactga
DBGET
integrated database retrieval system
