Scomber japonicus (chub mackerel): 128374609
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Entry
128374609 CDS
T09718
Symbol
zmp:0000001082
Name
(RefSeq) integrin alpha-D
KO
K05718
integrin alpha L
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04514
Cell adhesion molecule (CAM) interaction
sjo04517
IgSF CAM signaling
sjo04518
Integrin signaling
sjo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128374609 (zmp:0000001082)
04517 IgSF CAM signaling
128374609 (zmp:0000001082)
04518 Integrin signaling
128374609 (zmp:0000001082)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128374609 (zmp:0000001082)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128374609 (zmp:0000001082)
04515 Cell adhesion molecules [BR:
sjo04515
]
128374609 (zmp:0000001082)
04090 CD molecules [BR:
sjo04090
]
128374609 (zmp:0000001082)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128374609 (zmp:0000001082)
Cell adhesion molecules [BR:
sjo04515
]
Integrins
Integrin alpha subunits
128374609 (zmp:0000001082)
CD molecules [BR:
sjo04090
]
Proteins
128374609 (zmp:0000001082)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
VWA_2
ITGAX-like_Ig_3
FG-GAP_3
IL12
Motif
Other DBs
NCBI-GeneID:
128374609
NCBI-ProteinID:
XP_053190826
LinkDB
All DBs
Position
2:34885165..34923071
Genome browser
AA seq
1246 aa
AA seq
DB search
MHGQRLIFLLTYMVAYAISVSLAFNLDITQPEVYNGEQEDFFGYKVHQYTSGKDKGIIVT
APLKLNGSGGICKPRQNQTAECFNPKENPFENKTVQVKHLGLSLAVNSISSIFTVCSPSV
VHECDENSYLNSVCYKITDQLEQISSFQSGFQKCTKKTVDLVFLFDGSESMTTAEFGKNK
DFIVDIMKSFGNSSIKFAAAQFSTITKTVFNFKDYEAGRFGPKLRAEPHMKGLTNTHKAL
KFVLDKILTNENAGASPDATKVLVLITDGDPSDSNRKLEIIEKYDELNIIRFVIGVKITN
LDKVKTIASEPKDKNAFKIDNYAGLTGILDNFQKRIFTTEGSKVSRAGEMTNEMSQSGFS
AVAYKDTLILGSVGSNSWRGSLHEVEVEQTEKTIEDPDMKMDSYMGYSVAVGERDNTTLY
FTGAPRFEYKGQVVVFKHNGSSWITSKRINGYQIGSYFGAEICSVDINSDDDTDFLLVGA
PLFYHADEKKEGRIYIYTLTNEMDLKSEMNVTAPSMGRFGTTISSIADLNGDFLRDLAVG
APLEDENRGAVYIYLGDSRKGIRSTFSQRITGQDFRPMLRFFGQAIDGNIDLGEDGLPDI
VVGSHGAAVVLRSRPVFNVKAHLSFQPKEISTEEIDCVVNTDHILPLVTLTVCFEMVEAT
QSREGIAGYGLNISYMLDVDPTRPTHRGFFSDTDRKARNLITTYELTDKETCVNHSINMK
KCVRDTLSSISIKLNFSQVDSERASAVLNVDSERQTGVEVPFKKECRKNDACIAELEVDL
DFESSTFLVAEDNSFNVFITLSNEGDDSYNTSLTMHYPPGLSFSRMTPKKDTRPTLHICH
DLHGVIDKSLCSVSLPVYRSRSKAYYNASFRIEYDPREYEWNDTISMTVVGNSDNMASNQ
NNSMTKSLPVKYEIKMATTVSDGSTNYMIFTPEDSEPKELVNIFTIDNLGLKAFPVNFSL
LFPTKLAHEFEMTNYQVSVQQNKTECTRIIDIDSKEHIKDQHWKMIMCDSFILDGASTTE
VKLYGDVQFRGLKNNAENMIFTEKYRNKGGVVEFRSHLHVSYDDNRYVLNSDRQKNDQGS
VNSNDPRKKETAVQIEFLIPASEPLIIGTGVVLGLIFLLILTFCLIKCGCFKRRLPKEDD
WDEANGKAQLEPLNPDQEYANADIFAHDVDIPEYANADIFAHDVDIPEYVDVIELPDEKE
ASEYINIIEEDNSDGNGANGKAQQEPLDPNQGNGEVAPLLDNNQDN
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgcatgggcagcgcctcatctttctgctcacctatatggtggcttacgccatctccgtt
tctttggctttcaaccttgatatcacacaacctgaagtctacaatggtgaacaagaagat
ttctttggatacaaagtgcatcagtacacatctggaaaggacaaagggataattgtcact
gcacctctgaagctgaatggatctgggggaatatgcaaaccccggcaaaaccaaacggca
gagtgtttcaatcctaaagaaaatccttttgaaaacaaaacagtacaagtcaagcacctt
ggactgtccctggcagtgaactccatcagctccatattcactgtctgcagtccaagtgtg
gttcacgagtgtgatgagaactcctatctgaacagtgtgtgctacaagatcacagatcaa
cttgagcaaatctcctctttccaatccggtttccaaaaatgcacaaaaaagacagtggac
cttgtctttctatttgatggatcagagagtatgaccactgctgaatttggaaaaaataaa
gatttcatagtggatataatgaaaagtttcggtaattcatcaatcaagtttgcagcagct
cagttcagcacaattaccaagacagtgtttaacttcaaagactatgaagctggtagattt
ggcccaaaacttagggctgaacctcatatgaagggtctcaccaacacacacaaagccctc
aaatttgtgctggacaaaatccttacaaacgagaatgccggcgcctctcctgatgcaacc
aaagttctggtactgatcacagatggagatccaagtgatagcaacagaaaacttgaaatt
attgagaaatatgatgaattaaatatcattcgatttgtcattggggttaaaattacaaat
ctggataaagttaagaccattgcttcagaaccgaaagacaaaaacgctttcaaaatagat
aactacgctggactcacaggaatactggataactttcaaaaaaggatctttactacagaa
ggctccaaagtgtctcgagcaggagagatgaccaatgaaatgtcccagagtggattcagt
gctgtcgcctacaaagacaccttgattctgggttcagtgggatcaaacagctggcgtggg
tctctacatgaagttgaagttgaacaaacagaaaaaactattgaagatccagacatgaag
atggactcgtacatgggatactctgttgctgttggagagagagacaacaccactctgtat
ttcacgggtgcaccgagatttgagtacaaaggacaggttgtagttttcaaacacaatggc
agtagctggatcacaagcaaacgcataaatgggtaccagatcggttcctactttggtgca
gagatctgctcagtagatattaactcagatgatgacactgatttcctgctggtgggggct
ccactgttctaccacgctgatgagaagaaagaaggacggatctatatctacacactgact
aatgagatggacctgaaaagtgagatgaatgtgactgcaccctccatgggtagatttggc
acaaccatatccagtatcgccgatctgaatggagattttcttcgagaccttgctgttgga
gcgccccttgaggatgaaaataggggggctgtgtacatctacctgggtgacagtcgcaaa
ggcatacgcagcactttcagccagagaatcacaggacaagatttcagacctatgctgaga
ttctttggacaggccattgatggaaacattgaccttggagaggatgggctcccagatatt
gtggtcggatcacatggcgcagccgttgtcttaagatccaggcctgtctttaatgtcaag
gctcatctgtcttttcaacctaaggagataagcactgaggaaattgactgtgtggtcaat
acagatcacattttaccattggttacattaacagtctgttttgaaatggtagaagcaaca
cagagcagagagggcatagcgggctacggactcaacatttcctatatgcttgacgttgat
ccaacgagaccaacacatcgaggtttcttcagtgatactgacaggaaagctagaaatctt
attaccacctatgagctgacagataaagagacctgcgtcaaccactccatcaacatgaaa
aaatgtgtgagggacacattatcatccatcagcatcaaattaaacttttcacaagttgac
agtgagagagcgagtgccgtgctgaacgtggacagtgaaaggcagactggtgttgaggtt
ccgtttaaaaaagaatgtagaaaaaatgacgcctgtattgctgagcttgaggtggatttg
gatttcgagagctcaacatttttggtggcagaagataacagctttaatgtgtttataaca
ctgtcgaatgaaggcgatgactcgtataacaccagcctcacaatgcactatcctccagga
ctctccttctctcggatgactcctaaaaaggacacaagaccaacactccacatatgtcat
gatcttcatggcgttattgacaaatctttatgtagtgtcagccttcctgtgtatcggagc
agatcaaaggcatactataatgcttctttccgcattgaatatgaccccagagagtatgag
tggaatgacacaatttcgatgactgttgttggaaacagtgataatatggcatctaaccaa
aacaattcaatgaccaaaagcctcccagtaaaatatgaaattaaaatggcaacaacagtg
tcagatggctccaccaactacatgatctttacaccagaggacagtgaacctaaagaactg
gtcaatatattcacgattgataatcttggtttgaaggcctttcctgtcaatttttccctt
ctcttcccgactaaactggcacatgaatttgaaatgacaaactatcaagtctcggtccag
cagaacaagactgaatgtacacgcattatcgacattgattcaaaagaacacataaaagac
caacactggaaaatgataatgtgtgacagtttcatcctggacggagcatcaaccactgag
gttaaattgtatggagatgtacaattcaggggcctcaaaaacaatgcagagaatatgata
tttacagaaaaatatagaaacaaaggaggagtggttgaattcagaagccatctacatgtt
agttatgatgacaaccgatatgtgctaaattctgacagacaaaagaatgatcaggggagt
gtaaattcaaatgatccaagaaagaaagagactgctgttcaaattgagtttttaattcct
gctagtgaaccactgataattggaactggagttgtgttgggattaatctttttgttaata
ctcactttctgtctaattaagtgtggttgcttcaagaggagattacctaaagaggatgac
tgggacgaggccaatggcaaggctcagctagagcctctgaaccctgatcaggaatacgca
aacgctgacatatttgcacacgacgtagacattccggaatacgcaaacgctgacatattt
gcacacgacgtagacattccggaatacgtagacgtcattgaacttccagacgaaaaagaa
gccagcgagtatataaatattatagaagaggacaattcggacgggaacggggccaatggc
aaggctcagcaagagcctctggaccctaatcagggaaatggagaagttgctcctctactt
gacaataaccaagacaactag
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integrated database retrieval system
