Scomber japonicus (chub mackerel): 128374633
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Entry
128374633 CDS
T09718
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1 [EC:3.6.4.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128374633 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128374633 (pex1)
Membrane trafficking [BR:
sjo04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
128374633 (pex1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
ABC_tran
AAA_28
DUF815
AAA_18
AAA_5
NACHT
Sigma54_activ_2
TIP49
ATP-synt_ab
AAA_33
AAA_24
Sigma54_activat
Zeta_toxin
AAA_7
AAA_29
RuvB_N
TsaE
ATPase
Mg_chelatase
IstB_IS21
KAP_NTPase
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
128374633
NCBI-ProteinID:
XP_053190839
LinkDB
All DBs
Position
15:17864425..17875893
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AA seq
1250 aa
AA seq
DB search
MFSNQGIQPVTVVFNNTKNCFLHLPSKLISHLSLNENQALELSWGHGSPVFLSWTQNRTS
SSLDSHQVELCRQLGEKLGLKDGEQGFLRPCHQVSSVHQVFVEPVSTDDWEILELHSAAL
EQQLLDQIRVVFQDAVFPVWVDSHTAIYIQIVSLSPSVPYGRLEQFTELIVSPKSRAGIG
NLSGSLVRTSQNQRPHSGPNLSDAVGSSLESTSSVPQSHQWGGIADLKSLLRYMITGTHN
PVKELPPVPEIPALLTDSVYRVCGAPPDSLCTVSHFATGVIHLFSWSHGLNGSQSPVTYG
LISKVPSPKEVRDRVKQAMEKKKNAGVSKVAATASGGEEMKEEQTTVVRVVCHGIDKLAS
KHSPSPSKGAIHCGAVWIPQPLAIRLNIIPHSAVRIKPVKSTIKVASTIRLQPLKPLPEE
DDEAIQTAFLGWLHTRSHEPLACVTARFGTILLHGTDAKLEFALTVLKPEPESDHPDQLF
LLALSVIQKENIQVDREPVIMPAVKTAAEAPNPELPSLSILGGINELSNTGFEFISHSLL
GSPLSRELGTTGQGLQGGALLITGGKGSGKSSLSRALCRKAREDLDAHVEVVDCKKLQGK
RAETVRQMLQDIFEQAEWKQPSVVLLDDLDHMTGAQTSPEHEHGPEALVQQHIAQSLKDV
VDEMVVHCSLVCLIITSQSEHSLHTSLTEVQGSHFVQGFVHIQPPDKAQRAEILHCLILR
KSRLSEESLQTLDLGVVAKETEGYTPQDLALLLERAVHANTVQRGQGEQDVCLSWRDFAQ
ALKGFTPPSLWGADLHTPSGLGLERVGGLREVRQQLMDTIMLPAKYPILFANLPIRHRSG
VLLYGAPGTGKTLLARAVAKDSGMNYISIKGPELLSKYIGASEQGVRDVFQRAQAAKPCI
LFFDEFDSLAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRP
GRLDKSLYCPPPDLEARAEILKALSIGVPLAGDVDLQQLAAATEQFTGADLKALLYNAQL
EAVNNSLGNSTPHELTSGSDSDMSLSSMMFPNHSSGSDDSVGEGDPDVGLDQSIVLHEHS
ELQADDEHHCGNVWRLYFGSSYESELGNSPISGLNSHCVSGPNSMIHDFTGVSVRDPGSS
LPPAYMSSLQSGYEELGPEQLERLQQDINNIKNNSRRANEECVRVHSASSQLGLLLCPAH
LNSALAVTRPSLSKADWNKYTKLYEAFGGLEDGKYIQSVTFKPGQRVTLA
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcaatcagggcatccaaccagtcacggttgtttttaacaacacaaaaaactgc
tttcttcacctcccctccaagttgatttcacatctctccctgaacgagaatcaggctttg
gagttgtcctggggtcatggatctccagtgttcctcagctggactcaaaacagaacctcc
tctagcctcgacagccatcaagtggagttgtgtcgacaactgggagagaagctgggcctc
aaagatggagaacagggcttcctgagaccatgtcatcaggtctcatcagtgcatcaagtg
tttgtggagcctgtgtcgactgatgactgggagatcttggagctccacagcgctgcactg
gagcagcagttgttggatcagatcagagtagtgttccaagatgccgtgtttcctgtgtgg
gtggacagccacacagccatctacattcaaatagtatcactttcaccttctgtgccctat
ggtcggctggagcagttcacagaactgattgtctctcctaagagccgagctggaattggc
aacctcagtggttctctggtgagaaccagtcagaaccagcgtcctcatagcgggccaaac
ctgtccgacgccgtaggatcatcattagaaagtacctcctctgtccctcaaagtcaccag
tggggtggcatagctgacctgaagagcctgttacgctacatgataactggtactcataac
ccggttaaagagctacctcctgtacccgaaatccctgccctcctcactgactctgtctac
agagtatgtggcgcacctcctgactctctttgcaccgtaagccactttgcaactggtgtt
attcatttattttcctggagccacggattaaatggaagtcagtctccagtgacatatggt
ctgatctccaaagttccctcacctaaagaagtgagggacagagtcaagcaggctatggag
aaaaagaagaatgcaggagtttctaaagttgctgcaactgcgagtgggggagaggagatg
aaagaagaacaaaccacagtggtgagggtggtgtgccatggcattgataagctggcaagc
aagcatagtccaagtccaagtaagggagcgatccattgtggtgcagtatggatcccacag
ccccttgcgatcaggttgaatattatccctcattcagcagtaagaattaagccagtcaaa
tcaactatcaaagtagcttccactattcgcctgcagcctctaaaaccactgcctgaggag
gacgatgaggcgatccagacagcattcctgggttggttgcacactcgaagtcatgaacct
ttagcctgtgtgaccgcacggtttggcaccatcctcctacatggaaccgatgcaaagtta
gagtttgctttaactgtgctgaaaccagaacctgagagtgatcatccagaccagctgttt
ctactagcattatctgttatacagaaggaaaatatacaggtagacagagagccagtaatc
atgccagctgtaaaaactgcagctgaagcacctaatccagagcttccctctctcagtatt
cttggtgggatcaatgagcttagcaacactggatttgagttcatctctcacagccttctg
ggtagtcccctatcaagggagctgggtaccactggacagggactccaaggtggagcacta
ctcatcactggtggaaagggaagtggaaagagcagtctatcccgagccctgtgtaggaaa
gctagagaagatcttgatgcacatgtggaagtggtagactgcaaaaagctacaaggcaaa
agggcagaaactgtgagacagatgttacaggatatttttgaacaggcggagtggaagcag
ccctctgttgttctccttgatgatctggatcatatgacgggggcacagacctcaccggag
catgagcatggccctgaggcgctggttcaacagcacattgcacagagtttgaaggatgtg
gtggatgagatggtagttcactgcagcctggtgtgtctcatcatcaccagccagagcgag
cactccctccacacctcattgactgaggtgcaggggtcccacttcgtgcagggctttgta
cacatccagccaccagacaaggcacagagagcagagatcctgcactgtctgatcctcaga
aagtccaggctatcggaggagagcttacagactcttgacctgggagttgttgccaaggag
acggaaggatacacgcctcaagacctagcgctactgctggagcgagctgtccatgccaac
actgtacaaagagggcaaggtgaacaagatgtgtgtctgtcatggagggactttgcacag
gctctcaaggggtttacacctccctctctatggggggcagacctccacaccccaagtgga
cttgggcttgagagagtgggagggctgagagaagtgcgacagcagctaatggacaccata
atgctccctgctaagtatccaatcctgtttgccaatcttccaattcgccatcgctcagga
gtcctgctgtatggagctccgggcacagggaagaccctgctagccagggctgtggccaaa
gacagtggtatgaactacatcagcatcaagggacctgaacttctgagtaagtacattgga
gccagtgagcagggagtccgtgatgtctttcagagagcacaggctgctaagccatgcatc
ctgttcttcgatgagtttgactctctggcccccaggaggggtcacgacaatacaggtgtg
acagaccgtgtggtcaatcagcttctcacccagctggatggtgtggagggactgcaaggt
gtgtatgtgcttgcagccaccagtcgtcctgatctgattgatccggcactgctgagacct
ggacgactggacaagtctctctactgccctccccctgatctggaggcccgtgcagagatt
ctgaaggctttgagcattggtgtcccgctggctggtgatgtggacctgcaacagctggca
gcagcgacagagcagtttacaggggcagacctgaaggccctgctctacaatgcccagctg
gaggctgtcaacaacagcttgggcaacagcacaccgcatgagctgacgtctggctcagac
agtgacatgagtctgtcctccatgatgttcccgaaccacagcagtggctcagatgactca
gtgggagaaggggacccagatgtaggtctggatcagtccattgttctccatgagcacagt
gagctccaagcagacgatgaacaccactgcggcaatgtctggagactctactttggaagt
tcctacgagtcagagttggggaattcgccaatttctggattgaactctcattgtgtctct
ggacccaactcaatgattcatgacttcacaggagtatcggtccgtgaccctggtagctca
ctgccccctgcctatatgtcctcccttcagagtgggtatgaagagctcggcccagagcag
ctggagcgcctccaacaagacatcaataacatcaagaacaactccaggagagccaacgag
gagtgtgtccgggtgcattcagcctccagccagctgggtctgctgctgtgtccagctcat
ttgaactctgccttggcagtgaccagaccatctctgagcaaagccgactggaacaaatac
acaaaactgtatgaagcctttggaggtctagaagatggaaaatatattcagtcagtcaca
tttaaaccgggacaacgtgtgactttagcttga
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integrated database retrieval system
