Scomber japonicus (chub mackerel): 128374634
Help
Entry
128374634 CDS
T09718
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
sjo
Scomber japonicus (chub mackerel)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
128374634
NCBI-ProteinID:
XP_053190840
LinkDB
All DBs
Position
15:17666619..17697099
Genome browser
AA seq
1163 aa
AA seq
DB search
MSSVCVLKRKAVLWQDSFSPHHRTTSPSMPVVLSSGGHAPPTGQTPQATPPSQQGVAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPTGDNIHDSQVRSMDELNHDFQALALEGRAMGEQL
LTGKKFWETDDSGKDGPKGIFLDQWRDSAWGASDHSVSQPIMVSRRPGQGFHGGGEVGVG
SVMSPRSESGGLGVSMVEYVLSSSPADKLDSCLRKGPYGQRDGEVEEEKREKPKATFEGE
KLKELTEGEADVINDVINPNGLPVQNGLDVDVKEFGRPPGNMPAPGPEGDLLGGPGGVGA
EGLTALGGGGGPKPPEDFSGVEQGGVTMDPMESVMEPLQFDYNSQMPMDSAPTVGLFDYT
NQQQLFQRNNALAVQQLTAAQQQQYALAAAQQPHIGLAPAFVPNPYIISAAPPGTDPYAA
GLAAAATLGPAVMPPQYYGVTPWGVYPANLFQQQAAAANNSANQQAAGQGQQNQQQVMRA
GGNQRPLTPSQGQQGQQNDQLVAAAAVNSALAFGQGLAAGVPGYPVLAPAAYYDQTGALV
VNTGARSGPVRLMAPASVIISPSAAQAVAAAAASAGGANGGLGGGANGPFRAMTSQQAQQ
QGGPGGALGGSSFYGSSSLSSSSQSSSLFSQGSAQPGPGSASLGFSQPTSSSLGATLGAT
LGGFGTAVANSSGGSGSRRDSLTGNNELYKRTPSSLTPIGHGGFYNGTLGFSPSPGPVGM
PLPNQGPSHSLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAPGAEAKYRSAASSGSSLF
SPSSQLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLRDIAGHIMEFSQDQHGSRF
IQLKLERASPAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHV
LSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQP
HALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGN
YVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRAERAMLIDEVCS
LTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKYTYGKHILAK
LEKYYMKNGVDLGPLCGPPNGIM
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgtgtgtgtgttgaagaggaaagcagtgctctggcaggattcattcagcccc
caccatagaactacatctcccagcatgcccgtggtgctgagcagcggaggacatgcccct
ccaactgggcagacccctcaggccactcccccaagccagcagggtgtggctggtgctgga
cgttcccaggatgatgccatggtagactatttcttccagcggcagcacggtgaacagccc
ggcaaacatcgctggcccactggagacaacattcatgacagccaggtgcgatctatggac
gagctgaaccatgactttcaggctctggcattggagggccgcgccatgggagagcagctg
ctaactggtaagaagttctgggagaccgatgactctgggaaggatggaccaaaagggatc
ttcctggaccagtggagagacagtgcatggggtgcctcagatcactcggtgtctcagcca
atcatggtgtcccgtcggccagggcagggtttccatggtggtggtgaagttggggttggt
tcagtgatgtccccgcggtctgagagtggagggcttggagtaagcatggtggagtacgtc
ctctcctcctcaccggctgacaaactggattcctgcctccggaaaggaccttacgggcag
agggacggagaggtggaggaggagaagagggagaagccaaaggcaacgtttgagggagag
aaactgaaagagttgacagaaggtgaagctgatgtcattaacgacgtcatcaaccccaat
gggctgcctgtgcagaatggcctcgatgttgacgtcaaagagttcggtcgtcccccaggc
aacatgccggcccctggccccgagggtgacctgctcgggggtcccgggggtgtaggggca
gagggcctgacagccctgggaggtggtggtggccccaaaccccctgaggacttctctggt
gtagaacaaggtggtgtcaccatggaccccatggagtcagtgatggagccgcttcagttt
gactacaactcccagatgcccatggactctgcgcccactgtgggcctgtttgattacact
aaccagcagcagctgttccagagaaacaacgccctggcagtgcagcagttaacagcagcc
cagcagcagcagtacgccctggcagcagcacagcagcctcacattggtctggccccagca
tttgtgcccaatccttacatcatcagtgctgctccaccagggacagacccctacgcagcc
ggactagcagcagcagctacactcggtccagcagtgatgccaccccaatactatggtgtt
accccctggggagtctaccctgccaacctattccaacagcaggcggctgcagccaacaac
tcggccaatcagcaggcagcaggccaaggccagcagaaccaacagcaggtgatgcgtgct
gggggcaatcagcgacctctgacccccagccaagggcagcaggggcagcagaatgaccag
ctggttgcagcagcagcagtcaactcagctctagcctttgggcagggtctagcagcagga
gtccctggctacccagtcctagcccccgcagcctattacgatcagacgggggccctggtg
gtcaacactggagctaggagtggccctgtccgcctcatggcccccgcctctgtcatcatt
tctccttccgcagcacaagcagttgcagcagcagcagcctccgcaggtggtgccaacggt
ggtctgggtggcggggccaacggtccattccgtgccatgacatcccagcaggctcagcag
cagggcggccctggcggggctctgggtgggagctccttctacggctcgtcctccctcagc
tcctcctcccagagctcctctcttttctcacagggctctgcccagcctggtccaggatct
gcttccttgggcttcagccagcccacctcctcctccctcggtgccacactgggggccaca
ctgggaggctttggcactgcagtggcgaactcgagcgggggcagcggctccaggcgggac
tctctgacaggcaacaatgagctgtataaacgcacgccctccagcctcaccccgattggc
cacggaggcttctacaacggcaccttgggcttcagtccttcccctggtccagtgggtatg
cccctacccaaccagggcccctcccattccctcacacccccaccctccctgtccaatcac
agctcctcgtccaacctcaatcttggaggcctgaccaacggcagcgggcgtttcatctct
gcagccccaggagcagaagccaagtaccgcagcgccgccagttcaggctcctccctcttt
tcacccagcagccagctgttcccgtcgtcacggctacgctacggcatgtcggacgtaatg
ccgtcaggccgaagccgcctgctggaagacttcaggaacaaccgctaccccaacctgcag
ctcagagacatcgcgggccacatcatggagttcagccaggatcagcacggcagcaggttt
atccagttgaagttggagcgagccagtccagcagagcgccagcttgtctttagtgagata
ctccaggcggcctaccagctcatggtggacgtctttggaaattacgtcatccagaaattc
tttgagtttggcagcctggaccagaagctggctctggctgagaggatccgaggtcacgtg
ctgtctttggccctgcagatgtacggctgtagagtcattcagaaagctctggagttcatc
ccctcggatcagcaggtcattagcgagatggtgcgggagctggacggccatgtgttgaag
tgtgtgaaggatcagaacggtaaccacgtggtgcagaagtgtatcgagtgtgtccagcct
catgcgctgcacttcatcatagacgccttcaagggacaggtcttcgccctctctactcac
ccttacggctgccgagtcatccagcgcattctcgaacactgccttcctgaacagacgctg
cctatactagaggagctccatcaacatacagagcagcttgtgcaggaccagtatggcaac
tatgtgatccagcacgttttggagcacggccgagctgaggataagagcaagatagtggct
gagattagaggcaacgtactggggctcagccagcacaagtttgccagtaatgtggtggag
aagtgtgtgacccacgcatcgcgggcggaacgagcaatgctgatagacgaggtgtgcagc
ctgactgagggcccccacagtgccttatataccatgatgaaggaccagtacgccaactat
gtggtgcagaagatgatcgacgtggccgagcccacccagcgcaaaatagtaatgcacaag
atccggccccacatctccaccctgaggaagtacacgtatggaaaacacatcctggccaag
ctggagaagtactacatgaagaatggcgttgacctgggtcctctctgcgggccccctaat
ggcatcatgtaa
DBGET
integrated database retrieval system