KEGG   Scomber japonicus (chub mackerel): 128374634
Entry
128374634         CDS       T09718                                 
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
  KO
K17943  pumilio RNA-binding family
Organism
sjo  Scomber japonicus (chub mackerel)
SSDB
Motif
Pfam: PUF PUF_NOP9 CFAP61_N
Other DBs
NCBI-GeneID: 128374634
NCBI-ProteinID: XP_053190840
LinkDB
Position
15:17666619..17697099
AA seq 1163 aa
MSSVCVLKRKAVLWQDSFSPHHRTTSPSMPVVLSSGGHAPPTGQTPQATPPSQQGVAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPTGDNIHDSQVRSMDELNHDFQALALEGRAMGEQL
LTGKKFWETDDSGKDGPKGIFLDQWRDSAWGASDHSVSQPIMVSRRPGQGFHGGGEVGVG
SVMSPRSESGGLGVSMVEYVLSSSPADKLDSCLRKGPYGQRDGEVEEEKREKPKATFEGE
KLKELTEGEADVINDVINPNGLPVQNGLDVDVKEFGRPPGNMPAPGPEGDLLGGPGGVGA
EGLTALGGGGGPKPPEDFSGVEQGGVTMDPMESVMEPLQFDYNSQMPMDSAPTVGLFDYT
NQQQLFQRNNALAVQQLTAAQQQQYALAAAQQPHIGLAPAFVPNPYIISAAPPGTDPYAA
GLAAAATLGPAVMPPQYYGVTPWGVYPANLFQQQAAAANNSANQQAAGQGQQNQQQVMRA
GGNQRPLTPSQGQQGQQNDQLVAAAAVNSALAFGQGLAAGVPGYPVLAPAAYYDQTGALV
VNTGARSGPVRLMAPASVIISPSAAQAVAAAAASAGGANGGLGGGANGPFRAMTSQQAQQ
QGGPGGALGGSSFYGSSSLSSSSQSSSLFSQGSAQPGPGSASLGFSQPTSSSLGATLGAT
LGGFGTAVANSSGGSGSRRDSLTGNNELYKRTPSSLTPIGHGGFYNGTLGFSPSPGPVGM
PLPNQGPSHSLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAPGAEAKYRSAASSGSSLF
SPSSQLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLRDIAGHIMEFSQDQHGSRF
IQLKLERASPAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHV
LSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQP
HALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGN
YVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRAERAMLIDEVCS
LTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKYTYGKHILAK
LEKYYMKNGVDLGPLCGPPNGIM
NT seq 3492 nt   +upstreamnt  +downstreamnt
atgagcagtgtgtgtgtgttgaagaggaaagcagtgctctggcaggattcattcagcccc
caccatagaactacatctcccagcatgcccgtggtgctgagcagcggaggacatgcccct
ccaactgggcagacccctcaggccactcccccaagccagcagggtgtggctggtgctgga
cgttcccaggatgatgccatggtagactatttcttccagcggcagcacggtgaacagccc
ggcaaacatcgctggcccactggagacaacattcatgacagccaggtgcgatctatggac
gagctgaaccatgactttcaggctctggcattggagggccgcgccatgggagagcagctg
ctaactggtaagaagttctgggagaccgatgactctgggaaggatggaccaaaagggatc
ttcctggaccagtggagagacagtgcatggggtgcctcagatcactcggtgtctcagcca
atcatggtgtcccgtcggccagggcagggtttccatggtggtggtgaagttggggttggt
tcagtgatgtccccgcggtctgagagtggagggcttggagtaagcatggtggagtacgtc
ctctcctcctcaccggctgacaaactggattcctgcctccggaaaggaccttacgggcag
agggacggagaggtggaggaggagaagagggagaagccaaaggcaacgtttgagggagag
aaactgaaagagttgacagaaggtgaagctgatgtcattaacgacgtcatcaaccccaat
gggctgcctgtgcagaatggcctcgatgttgacgtcaaagagttcggtcgtcccccaggc
aacatgccggcccctggccccgagggtgacctgctcgggggtcccgggggtgtaggggca
gagggcctgacagccctgggaggtggtggtggccccaaaccccctgaggacttctctggt
gtagaacaaggtggtgtcaccatggaccccatggagtcagtgatggagccgcttcagttt
gactacaactcccagatgcccatggactctgcgcccactgtgggcctgtttgattacact
aaccagcagcagctgttccagagaaacaacgccctggcagtgcagcagttaacagcagcc
cagcagcagcagtacgccctggcagcagcacagcagcctcacattggtctggccccagca
tttgtgcccaatccttacatcatcagtgctgctccaccagggacagacccctacgcagcc
ggactagcagcagcagctacactcggtccagcagtgatgccaccccaatactatggtgtt
accccctggggagtctaccctgccaacctattccaacagcaggcggctgcagccaacaac
tcggccaatcagcaggcagcaggccaaggccagcagaaccaacagcaggtgatgcgtgct
gggggcaatcagcgacctctgacccccagccaagggcagcaggggcagcagaatgaccag
ctggttgcagcagcagcagtcaactcagctctagcctttgggcagggtctagcagcagga
gtccctggctacccagtcctagcccccgcagcctattacgatcagacgggggccctggtg
gtcaacactggagctaggagtggccctgtccgcctcatggcccccgcctctgtcatcatt
tctccttccgcagcacaagcagttgcagcagcagcagcctccgcaggtggtgccaacggt
ggtctgggtggcggggccaacggtccattccgtgccatgacatcccagcaggctcagcag
cagggcggccctggcggggctctgggtgggagctccttctacggctcgtcctccctcagc
tcctcctcccagagctcctctcttttctcacagggctctgcccagcctggtccaggatct
gcttccttgggcttcagccagcccacctcctcctccctcggtgccacactgggggccaca
ctgggaggctttggcactgcagtggcgaactcgagcgggggcagcggctccaggcgggac
tctctgacaggcaacaatgagctgtataaacgcacgccctccagcctcaccccgattggc
cacggaggcttctacaacggcaccttgggcttcagtccttcccctggtccagtgggtatg
cccctacccaaccagggcccctcccattccctcacacccccaccctccctgtccaatcac
agctcctcgtccaacctcaatcttggaggcctgaccaacggcagcgggcgtttcatctct
gcagccccaggagcagaagccaagtaccgcagcgccgccagttcaggctcctccctcttt
tcacccagcagccagctgttcccgtcgtcacggctacgctacggcatgtcggacgtaatg
ccgtcaggccgaagccgcctgctggaagacttcaggaacaaccgctaccccaacctgcag
ctcagagacatcgcgggccacatcatggagttcagccaggatcagcacggcagcaggttt
atccagttgaagttggagcgagccagtccagcagagcgccagcttgtctttagtgagata
ctccaggcggcctaccagctcatggtggacgtctttggaaattacgtcatccagaaattc
tttgagtttggcagcctggaccagaagctggctctggctgagaggatccgaggtcacgtg
ctgtctttggccctgcagatgtacggctgtagagtcattcagaaagctctggagttcatc
ccctcggatcagcaggtcattagcgagatggtgcgggagctggacggccatgtgttgaag
tgtgtgaaggatcagaacggtaaccacgtggtgcagaagtgtatcgagtgtgtccagcct
catgcgctgcacttcatcatagacgccttcaagggacaggtcttcgccctctctactcac
ccttacggctgccgagtcatccagcgcattctcgaacactgccttcctgaacagacgctg
cctatactagaggagctccatcaacatacagagcagcttgtgcaggaccagtatggcaac
tatgtgatccagcacgttttggagcacggccgagctgaggataagagcaagatagtggct
gagattagaggcaacgtactggggctcagccagcacaagtttgccagtaatgtggtggag
aagtgtgtgacccacgcatcgcgggcggaacgagcaatgctgatagacgaggtgtgcagc
ctgactgagggcccccacagtgccttatataccatgatgaaggaccagtacgccaactat
gtggtgcagaagatgatcgacgtggccgagcccacccagcgcaaaatagtaatgcacaag
atccggccccacatctccaccctgaggaagtacacgtatggaaaacacatcctggccaag
ctggagaagtactacatgaagaatggcgttgacctgggtcctctctgcgggccccctaat
ggcatcatgtaa

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